RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 C17orf78Q8N4C9 275 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 TMEM252Q8N6L7 170 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 RBMXL3Q8N7X1 1067 aaKnown RBP13.96□□□□□ -0.17
TMEM53-208ENST00000476724 LFNGQ8NES3 379 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 ADAT1Q9BUB4 502 aaKnown RBP13.96□□□□□ -0.17
TMEM53-208ENST00000476724 C19orf12Q9NSK7 152 aa13.96□□□□□ -0.17
TMEM53-208ENST00000476724 ACACAQ13085 2346 aa13.96□□□□□ -0.18
TMEM53-208ENST00000476724 UMAD1C9J7I0 102 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 AQP7O14520 342 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 HSPA12AO43301 675 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 TSPAN9O75954 239 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 CNOT4O95628 575 aaKnown RBP13.95□□□□□ -0.18
TMEM53-208ENST00000476724 PRH1P02810 166 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 ERVK11-1P61568 191 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 ZNF616Q08AN1 781 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 GABRA6Q16445 453 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 INO80CQ6PI98 192 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-208ENST00000476724 Q6ZS92 163 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 KDF1Q8NAX2 398 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-208ENST00000476724 AKR1E2Q96JD6 320 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 IGHV1-2P23083 117 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 ID4P47928 161 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 HFEQ30201 348 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 CXorf66Q5JRM2 361 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-208ENST00000476724 SPATA46Q5T0L3 261 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 HSD17B11Q8NBQ5 300 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 SCCPDHQ8NBX0 429 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 OR10V1Q8NGI7 309 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 TRIB1Q96RU8 372 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 CLCF1Q9UBD9 225 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 ERRFI1Q9UJM3 462 aaPredicted RBP13.95□□□□□ -0.18
TMEM53-208ENST00000476724 MSRB2Q9Y3D2 182 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 ESPL1Q14674 2120 aa13.95□□□□□ -0.18
TMEM53-208ENST00000476724 A0A1B0GU03 582 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 IGSF23A1L1A6 192 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 IQCF6A8MYZ5 107 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 WRBO00258 174 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 DLL1O00548 723 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 SSSCA1O60232 199 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 F12P00748 615 aaPredicted RBP13.94□□□□□ -0.18
TMEM53-208ENST00000476724 ACAA1P09110 424 aaPredicted RBP13.94□□□□□ -0.18
TMEM53-208ENST00000476724 GUK1Q16774 197 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 CBLN2Q8IUK8 224 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 PBDC1Q9BVG4 233 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 OR2J1Q9GZK6 312 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 SVILO95425 2214 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 TMEM210A6NLX4 147 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.94□□□□□ -0.18
TMEM53-208ENST00000476724 SH2D1BO14796 132 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 SERPINE2P07093 398 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 LMO1P25800 156 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 ZNF146Q15072 292 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 OR8G1Q15617 311 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 ZNF497Q6ZNH5 498 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 FAM214BQ7L5A3 538 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 GCNT2Q8N0V5 402 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 PARP12Q9H0J9 701 aaKnown RBP13.94□□□□□ -0.18
TMEM53-208ENST00000476724 SMDT1Q9H4I9 107 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 PRELID1Q9Y255 219 aa13.94□□□□□ -0.18
TMEM53-208ENST00000476724 CEP295Q9C0D2 2601 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 A0A1B0GW64 132 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 C9JQL5 133 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 OR2H2O95918 312 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 PGA5P0DJD9 388 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 IDH3GP51553 393 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-208ENST00000476724 Q6ZT83 130 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 WDR86Q86TI4 376 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 OR8G5Q8NG78 346 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 PLPPR1Q8TBJ4 325 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 GNPNAT1Q96EK6 184 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-208ENST00000476724 SCRT1Q9BWW7 348 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 SH3BGRL3Q9H299 93 aa13.93□□□□□ -0.18
TMEM53-208ENST00000476724 ANKRD11Q6UB99 2663 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-208ENST00000476724 GTF3C1Q12789 2109 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 K7N7A8 449 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 SLC33A1O00400 549 aaPredicted RBP13.92□□□□□ -0.18
TMEM53-208ENST00000476724 CELA3BP08861 270 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 TUBG1P23258 451 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 FIP1L1Q6UN15 594 aaKnown RBP13.92□□□□□ -0.18
TMEM53-208ENST00000476724 SLC25A40Q8TBP6 338 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 LSM10Q969L4 123 aaKnown RBP13.92□□□□□ -0.18
TMEM53-208ENST00000476724 TUBG2Q9NRH3 451 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 TRAPPC2LQ9UL33 140 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 TNFSF12O43508 249 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 CHST1O43916 411 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 ZNF154Q13106 437 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 CLINT1Q14677 625 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 GUSBP1Q15486 140 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 TMEM182Q6ZP80 229 aaPredicted RBP13.92□□□□□ -0.18
TMEM53-208ENST00000476724 OR1J1Q8NGS3 322 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 OR2G3Q8NGZ4 309 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 SARAFQ96BY9 339 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 ABHD17AQ96GS6 310 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 GPHA2Q96T91 129 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 EIF5A2Q9GZV4 153 aaKnown RBP13.92□□□□□ -0.18
TMEM53-208ENST00000476724 MAGT1Q9H0U3 335 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 MBNL3Q9NUK0 354 aaKnown RBP13.92□□□□□ -0.18
TMEM53-208ENST00000476724 TAAR3PQ9P1P4 343 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 MLXQ9UH92 298 aa13.92□□□□□ -0.18
TMEM53-208ENST00000476724 PRELID3BQ9Y3B1 194 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms