RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 TMPRSS2O15393 492 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 SPINT2O43291 252 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 SFT2D2O95562 160 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUS4LO95620 317 aaKnown RBP11.43□□□□□ -0.58
TRAF4-210ENST00000475329 HBZP02008 142 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUX4L2P0CJ85 424 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUX4L3P0CJ86 424 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUX4L4P0CJ87 422 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUX4L5P0CJ88 424 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUX4L6P0CJ89 424 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUX4L7P0CJ90 424 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 CD34P28906 385 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
TRAF4-210ENST00000475329 CCDC71LQ8N9Z2 235 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 UXS1Q8NBZ7 420 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 OR1L1Q8NH94 360 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 UBALD1Q8TB05 177 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 C14orf79Q96F83 325 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 ZNF486Q96H40 463 aaPredicted RBP11.43□□□□□ -0.58
TRAF4-210ENST00000475329 PHB2Q99623 299 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 RSRP1Q9BUV0 290 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 SLC5A7Q9GZV3 580 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 OR6C3Q9NZP0 311 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 OR1A1Q9P1Q5 309 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 DUX4Q9UBX2 424 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 LAMP3Q9UQV4 416 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 OR2W1Q9Y3N9 320 aa11.43□□□□□ -0.58
TRAF4-210ENST00000475329 CRYM-AS1A6NIL9 109 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 ADAM20O43506 726 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 NDUFA2O43678 99 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 RP2O75695 350 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 FSTL3O95633 263 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 CXCL3P19876 107 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 GZMHP20718 246 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 EIF2B2P49770 351 aaKnown RBP11.42□□□□□ -0.58
TRAF4-210ENST00000475329 PIGPP57054 158 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 MRPS11P82912 194 aaKnown RBP11.42□□□□□ -0.58
TRAF4-210ENST00000475329 SGPP2Q8IWX5 399 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 FAM185AQ8N0U4 392 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 CASTOR1Q8WTX7 329 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 MITD1Q8WV92 249 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 SECTM1Q8WVN6 248 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 NINJ1Q92982 152 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 ARL11Q969Q4 196 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 DMRTB1Q96MA1 342 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 FYTTD1Q96QD9 318 aaKnown RBP11.42□□□□□ -0.58
TRAF4-210ENST00000475329 ZNF436Q9C0F3 470 aaPredicted RBP11.42□□□□□ -0.58
TRAF4-210ENST00000475329 RAB9BQ9NP90 201 aa11.42□□□□□ -0.58
TRAF4-210ENST00000475329 SLC25A10Q9UBX3 287 aaPredicted RBP11.42□□□□□ -0.58
TRAF4-210ENST00000475329 TRGV10A0A0A0MS01 117 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 A0A0B4J2A0 478 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 IGKV1D-13A0A0B4J2D9 117 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 TEX13DA0A0J9YY54 714 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-210ENST00000475329 LYNX1G3V0Z9 82 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 C15orf65H3BRN8 121 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 GOSR2O14653 212 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 TNFRSF13BO14836 293 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-210ENST00000475329 IFNA2P01563 188 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 IGKV1-13P0DP09 117 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 LYNX1P0DP58 116 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 RPS2P15880 293 aaKnown RBP11.41□□□□□ -0.58
TRAF4-210ENST00000475329 COL8A2P25067 703 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 SSTR5P35346 364 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 SUPT4H1P63272 117 aaKnown RBP11.41□□□□□ -0.58
TRAF4-210ENST00000475329 TLE4Q04727 773 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 SLC9A3R2Q15599 337 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 CR1LQ2VPA4 569 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 ZFP69Q49AA0 526 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 PHLDA2Q53GA4 152 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 CLEC18BQ6UXF7 455 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 OR10V1Q8NGI7 309 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 COQ8AQ8NI60 647 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 TMEM246Q9BRR3 403 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 DCTN5Q9BTE1 182 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 NAA60Q9H7X0 242 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 SLC2A9Q9NRM0 540 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 RDH8Q9NYR8 311 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 KAAG1Q9UBP8 84 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 SHPKQ9UHJ6 478 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 SMG1Q96Q15 3661 aaKnown RBP11.41□□□□□ -0.58
TRAF4-210ENST00000475329 HRNRQ86YZ3 2850 aaPredicted RBP11.41□□□□□ -0.58
TRAF4-210ENST00000475329 DOPEY1Q5JWR5 2465 aa11.41□□□□□ -0.58
TRAF4-210ENST00000475329 RELNP78509 3460 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 GPR31O00270 319 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 NDUFB3O43676 98 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 SLC22A5O76082 557 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 IGHV2-70P01814 119 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 HEXAP06865 529 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 GIPP09681 153 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-210ENST00000475329 DAOP14920 347 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 NDUFB7P17568 137 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 S100GP29377 79 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 CEACAM6P40199 344 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 LUMP51884 338 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-210ENST00000475329 RND3P61587 244 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 HTD2P86397 168 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 LRRC10Q5BKY1 277 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 RTN4IP1Q8WWV3 396 aaPredicted RBP11.4□□□□□ -0.58
TRAF4-210ENST00000475329 TIMD4Q96H15 378 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 CALYQ9NYX4 217 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms