RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 FAM90A13PP0C7W8 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A14PP0C7W9 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A24PP0C7X0 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 VSIG8P0DPA2 414 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 NFYBP25208 207 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 BRS3P32247 399 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 HABP2Q14520 560 aaPredicted RBP12.19□□□□□ -0.46
VARS-223ENST00000474643 NKAPLQ5M9Q1 402 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 RSBN1Q5VWQ0 802 aaPredicted RBP12.19□□□□□ -0.46
VARS-223ENST00000474643 HIST2H2BDQ6DRA6 164 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 OR10K2Q6IF99 312 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 CLVS1Q8IUQ0 354 aaPredicted RBP12.19□□□□□ -0.46
VARS-223ENST00000474643 LYG1Q8N1E2 194 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 ZNF596Q8TC21 504 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 MRGPRDQ8TDS7 321 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 CORO2AQ92828 525 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 DGCR14Q96DF8 476 aaKnown RBP12.19□□□□□ -0.46
VARS-223ENST00000474643 Q96M66 194 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 NEDD4LQ96PU5 975 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 ETAA1Q9NY74 926 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 CEPT1Q9Y6K0 416 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 TRAV39A0A0B4J263 110 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 FAM172BPA6NC97 362 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 A6NDX4 124 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 AIPO00170 330 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 OPN1MWP04001 364 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 OPN1MW2P0DN77 364 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 OPN1MW3P0DN78 364 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 FUT3P21217 361 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 SDC2P34741 201 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 CEACAM3P40198 252 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 LTC4SQ16873 150 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 HES5Q5TA89 166 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 HEPN1Q6WQI6 88 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 DYNAPQ8N1N2 210 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 OR13A1Q8NGR1 328 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 CCDC107Q8WV48 283 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 ISOC1Q96CN7 298 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 URM1Q9BTM9 101 aaKnown RBP12.18□□□□□ -0.46
VARS-223ENST00000474643 KCNK15Q9H427 330 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 CALYQ9NYX4 217 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 TRAPPC2LQ9UL33 140 aa12.18□□□□□ -0.46
VARS-223ENST00000474643 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 SHISA3A0PJX4 238 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 UBE2QL1A1L167 161 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 IFITM5A6NNB3 132 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 PDCD6O75340 191 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 CLDN12P56749 244 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
VARS-223ENST00000474643 RTN4RL2Q86UN3 420 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 ABHD12Q8N2K0 398 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 OR4F17Q8NGA8 305 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 PIFOQ8TCI5 191 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 SLC25A46Q96AG3 418 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 CREB3L1Q96BA8 519 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 KCTD12Q96CX2 325 aaKnown RBP12.17□□□□□ -0.46
VARS-223ENST00000474643 R3HDM4Q96D70 268 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 GFI1Q99684 422 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 NCOR1P1Q9H4R4 102 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 RSL24D1Q9UHA3 163 aaKnown RBP12.17□□□□□ -0.46
VARS-223ENST00000474643 STEAP1Q9UHE8 339 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 TGP01266 2768 aa12.17□□□□□ -0.46
VARS-223ENST00000474643 LEUTXA8MZ59 168 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 MMP23AO75900 390 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 CD28P10747 220 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 MNDAP41218 407 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 DYNLT3P51808 116 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 VBP1P61758 197 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 OR2W3Q7Z3T1 314 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 OR51D1Q8NGF3 324 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 OR4K15Q8NH41 348 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 CFHR4Q92496 578 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 PTX4Q96A99 478 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 FAM3DQ96BQ1 224 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 NAA50Q9GZZ1 169 aaKnown RBP12.16□□□□□ -0.46
VARS-223ENST00000474643 IDI2-AS1Q9NZ38 188 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 RCC2Q9P258 522 aaKnown RBP12.16□□□□□ -0.46
VARS-223ENST00000474643 DPM3Q9P2X0 92 aa12.16□□□□□ -0.46
VARS-223ENST00000474643 SMIM30A4D0T7 59 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 A6NHS1 94 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 TMEM14DPA8MWL7 114 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 G3V4G9 280 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 H3BMQ9 156 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 GLAP06280 429 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 PF4V1P10720 104 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 GZMHP20718 246 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 BLVRBP30043 206 aaPredicted RBP12.15□□□□□ -0.46
VARS-223ENST00000474643 SSTR5P35346 364 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 RPS19P39019 145 aaKnown RBP12.15□□□□□ -0.46
VARS-223ENST00000474643 PRRX1P54821 245 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 OR10A3P58181 314 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 NCS1P62166 190 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 PAX5Q02548 391 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 UNC119Q13432 240 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 C17orf58Q2M2W7 97 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
VARS-223ENST00000474643 SFXN4Q6P4A7 337 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms