RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 NPIPB11E5RHQ5 1161 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 NPIPA3F8WFD2 350 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 DEGS1O15121 323 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 DHHO43323 396 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 PDE6DO43924 150 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 SSSCA1O60232 199 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 NRASP01111 189 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 SERPINE2P07093 398 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 CXCL1P09341 107 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 FREM3P0C091 2139 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 FTH1P19P0C7X4 201 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 GZMBP10144 247 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 GNRHRP30968 328 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 IDH3GP51553 393 aaPredicted RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 DYNLT3P51808 116 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 RBM11P57052 281 aaKnown RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 UBE2NP61088 152 aaKnown RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 MEF2BQ02080 365 aaPredicted RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 BSXQ3C1V8 233 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 FAM90A2PQ658T7 463 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF385CQ66K41 422 aaPredicted RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 HIST2H2BCQ6DN03 193 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 SELENOHQ8IZQ5 122 aaKnown RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 GPR137CQ8N3F9 429 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 ARL6IP6Q8N6S5 226 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 ZBTB34Q8NCN2 500 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 FRZBQ92765 325 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 PIGTQ969N2 578 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 MEGF10Q96KG7 1140 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 RBM14Q96PK6 669 aaKnown RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 CIB3Q96Q77 187 aaPredicted RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 SMIM7Q9BQ49 75 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM204Q9BSN7 226 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 LRRC61Q9BV99 259 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 STRADBQ9C0K7 418 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 VN1R1Q9GZP7 353 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 MAP1LC3BQ9GZQ8 125 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF442Q9H7R0 627 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 LIN7CQ9NUP9 197 aaKnown RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 GNG13Q9P2W3 67 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 PRSS50Q9UI38 385 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 NXT1Q9UKK6 140 aaKnown RBP6.93□□□□□ -1.3
CCDC93-208ENST00000474546 LAMP3Q9UQV4 416 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 B3GALT1Q9Y5Z6 326 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 ADAMTS9Q9P2N4 1935 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 BSNQ9UPA5 3926 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 TRBV9A0A0B4J1U6 114 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 A0A1B0GV90 55 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 XKRY2A2RUG3 117 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 NKX2-6A6NCS4 301 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 FAM24AA6NFZ4 105 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 LMO7DNF2Z398 122 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 C17orf112F2Z3M2 114 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 F6UZH7 168 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 PHOX2AO14813 284 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 RER1O15258 196 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 CYTIPO60759 359 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 ONECUT2O95948 504 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 DBHP09172 617 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 FAHP16930 419 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 BTF3P20290 206 aaKnown RBP6.92□□□□□ -1.3
CCDC93-208ENST00000474546 GALR1P47211 349 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 FHITP49789 147 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 FXYD4P59646 89 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 TRIP6Q15654 476 aaKnown RBP6.92□□□□□ -1.3
CCDC93-208ENST00000474546 PHLDA2Q53GA4 152 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 C1orf194Q5T5A4 169 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 RIPPLY2Q5TAB7 128 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 WDR74Q6RFH5 385 aaPredicted RBP6.92□□□□□ -1.3
CCDC93-208ENST00000474546 SPNS3Q6ZMD2 512 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 TBC1D26Q86UD7 250 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 MKXQ8IYA7 352 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 SLC22A18ASQ8N1D0 253 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 OR52M1Q8NGK5 317 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 OR2T10Q8NGZ9 312 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 CPT1CQ8TCG5 803 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 PATE1Q8WXA2 126 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 SPACA9Q96E40 222 aaPredicted RBP6.92□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF845Q96IR2 970 aaPredicted RBP6.92□□□□□ -1.3
CCDC93-208ENST00000474546 SPACA5Q96QH8 159 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 NKX3-1Q99801 234 aaPredicted RBP6.92□□□□□ -1.3
CCDC93-208ENST00000474546 RARRES2Q99969 163 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 FAAP24Q9BTP7 215 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 TPSD1Q9BZJ3 242 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 PARP12Q9H0J9 701 aaKnown RBP6.92□□□□□ -1.3
CCDC93-208ENST00000474546 SLC39A9Q9NUM3 307 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 PLEK2Q9NYT0 353 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 PRR13Q9NZ81 148 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 MYOTQ9UBF9 498 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 ST3GAL6Q9Y274 331 aa6.92□□□□□ -1.3
CCDC93-208ENST00000474546 ANKHD1Q8IWZ3 2542 aaKnown RBP6.92□□□□□ -1.3
CCDC93-208ENST00000474546 CABIN1Q9Y6J0 2220 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 IGKV1D-43A0A0B4J1Z2 117 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 LOC101059948A0A1B0GTJ6 334 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 CTXND1A0A1B0GTU2 59 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 TCRBV21S2A2A0A5A6 115 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM210A6NLX4 147 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 F5H5K5 113 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 H3BMH7 237 aa6.91□□□□□ -1.3
CCDC93-208ENST00000474546 TUSC2O75896 110 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms