RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 NDUFA8P51970 172 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 SEC61A1P61619 476 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 GRB2P62993 217 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 COL9A3Q14050 684 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 ZNF141Q15928 474 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 FNDC7Q5VTL7 733 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 SPNS2Q8IVW8 549 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 SUMF2Q8NBJ7 301 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 OR51G1Q8NGK1 321 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 PNPLA2Q96AD5 504 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ZNF419Q96HQ0 510 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 RTBDNQ9BSG5 229 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 ELL3Q9HB65 397 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 FKBP11Q9NYL4 201 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 FTSJ1Q9UET6 329 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 CYSLTR1Q9Y271 337 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 TIMM13Q9Y5L4 95 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 KIAA0556O60303 1618 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ARHGEF28Q8N1W1 1705 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 TET3O43151 1660 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 OTOL1A6NHN0 477 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 TYROBPO43914 113 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ZNF354AO60765 605 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 RAMP1O60894 148 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TTRP02766 147 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 H1F0P07305 194 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 SELENOPP49908 381 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 RPS14P62263 151 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 TGFBR3Q03167 851 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 LAMTOR4Q0VGL1 99 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 CCL15Q16663 113 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ENTPD8Q5MY95 495 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 LAIR2Q6ISS4 152 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TMEM184AQ6ZMB5 413 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 CLEC20AQ6ZU45 233 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 H2AFVQ71UI9 128 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TTC9CQ8N5M4 171 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 OR51A2Q8NGJ7 313 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TMED6Q8WW62 240 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ZNRF4Q8WWF5 429 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 MYEOVQ96EZ4 313 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 OR4C12Q96R67 309 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 FOXB1Q99853 325 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 CXXC4Q9H2H0 198 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 PILRAQ9UKJ1 303 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TRAV8-6A0A0B4J262 113 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TBX6O95947 436 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 TRGC2P03986 189 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 IRF1P10914 325 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 EPCAMP16422 314 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TNFSF9P41273 254 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 WDR5P61964 334 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 ROM1Q03395 351 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ZNF92Q03936 586 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 GINS1Q14691 196 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 RAB6CQ53S08 254 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 MEIG1Q5JSS6 88 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 AADACL3Q5VUY0 350 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 SLC25A26Q70HW3 274 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TMEM219Q86XT9 240 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 RNF175Q8N4F7 328 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 GGTLC1Q9BX51 225 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TMEM59Q9BXS4 323 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 RAB6CQ9H0N0 254 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ACER3Q9NUN7 267 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TAS2R8Q9NYW2 309 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TECRQ9NZ01 308 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 ZNF581Q9P0T4 197 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 DUSP13Q9UII6 198 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 WDR83OSQ9Y284 106 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ATRNO75882 1429 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 SCN10AQ9Y5Y9 1956 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 DAPL1A0PJW8 107 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 C7orf71A4D174 169 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 VCYO14598 125 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 LYRM1O43325 122 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ATP5LO75964 103 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TOXO94900 526 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 GPD1P21695 349 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 CNTFRP26992 372 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 HOXD3P31249 432 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 RPA3P35244 121 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 HINT1P49773 126 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 PIGFQ07326 219 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 EIF3IQ13347 325 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 TMEM183BQ1AE95 376 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 ANXA2RQ3ZCQ2 193 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 FBXL22Q6P050 247 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 DEFB125Q8N687 156 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 NPWQ8N729 165 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 MFSD8Q8NHS3 518 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 RNF128Q8TEB7 428 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 GMPPAQ96IJ6 420 aaPredicted RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 NTMQ9P121 344 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 DIP2CQ9Y2E4 1556 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 MARF1Q9Y4F3 1742 aaKnown RBP2.93□□□□□ -1.94
UBR3-208ENST00000474426 LINC00312Q9Y6C7 94 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 SMCHD1A6NHR9 2005 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms