RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CABLES2Q9BTV7 478 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 GPN1Q9HCN4 374 aaPredicted RBP8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 OR2S2Q9NQN1 319 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 SLC2A8Q9NY64 477 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 TAS2R3Q9NYW6 316 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 DUX4Q9UBX2 424 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 JPT1Q9UK76 154 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 LRRK2Q5S007 2527 aa8.53□□□□□ -1.04
PRPF38A-202ENST00000474048 LOC105371242A0A075B767 164 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 PPIAL4CA0A0B4J2A2 164 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 KBTBD11-OT1A0A1B0GTJ5 212 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 INMT-MINDY4F8WBC2 141 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 ARPC1BO15143 372 aaKnown RBP8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 LIPFP07098 398 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 ZNF728P0DKX0 622 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 PPIAL4GP0DN37 164 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 PAX1P15863 534 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 NFYAP23511 347 aaPredicted RBP8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 FPR2P25090 351 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 NFYBP25208 207 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 SSTR5P35346 364 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 CEACAM6P40199 344 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 LUMP51884 338 aaPredicted RBP8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 OXA1LQ15070 435 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 SURF2Q15527 256 aaPredicted RBP8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 C11orf91Q3C1V1 193 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 IGSF11Q5DX21 431 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 WDR25Q64LD2 544 aaPredicted RBP8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 BTNL3Q6UXE8 466 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 BTN2A1Q7KYR7 527 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 CMTM1Q8IZ96 169 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 ZDHHC22Q8N966 263 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 CCDC71LQ8N9Z2 235 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 DUSP18Q8NEJ0 188 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 OR1L1Q8NH94 360 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 RFESDQ8TAC1 157 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 UBALD1Q8TB05 177 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 C10orf105Q8TEF2 133 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 IGFBPL1Q8WX77 278 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 IDI2-AS1Q9NZ38 188 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 ONECUT1Q9UBC0 465 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 CTSZQ9UBR2 303 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 DOPEY2Q9Y3R5 2298 aa8.52□□□□□ -1.05
PRPF38A-202ENST00000474048 SPTAN1Q13813 2472 aaKnown RBP8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 IGKV1D-8A0A087WSZ0 117 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 TRBV6-7A0A0A0MS04 114 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 ENSAO43768 121 aaKnown RBP8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 PRAF2O60831 178 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 PEX14O75381 377 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 FOXH1O75593 365 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 PPYP01298 95 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 IGHV2-5P01817 119 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 WNT2P09544 360 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 RAB7AP51149 207 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 HTD2P86397 168 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 C4orf46Q504U0 113 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 SLC38A6Q8IZM9 456 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 OR2AK2Q8NG84 335 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 OR10A7Q8NGE5 316 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 CLDND2Q8NHS1 167 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 MARCH1Q8TCQ1 289 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 SECTM1Q8WVN6 248 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 GIMAP1Q8WWP7 306 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 DCTN5Q9BTE1 182 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 SLC5A7Q9GZV3 580 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 MMP28Q9H239 520 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 C19orf12Q9NSK7 152 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 ZNF221Q9UK13 617 aa8.51□□□□□ -1.05
PRPF38A-202ENST00000474048 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 TEX13DA0A0J9YY54 714 aaPredicted RBP8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 VGLL3A8MV65 326 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 NPIPB11E5RHQ5 1161 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 F5H0A9 414 aaPredicted RBP8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 TNFRSF13BO14836 293 aaPredicted RBP8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 PHF1O43189 567 aaPredicted RBP8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 SLC22A5O76082 557 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 ANXA3P12429 323 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 AADACP22760 399 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 BTCP35070 178 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 RAG2P55895 527 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 RAB25P57735 213 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 PLA1AQ53H76 456 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 Q5PR19 223 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 METTL11BQ5VVY1 283 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 TMEM200BQ69YZ2 307 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 HIST2H2BCQ6DN03 193 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 OR10V1Q8NGI7 309 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 FAM216AQ8WUB2 273 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 CORO2AQ92828 525 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 MOB3AQ96BX8 217 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 CYYR1Q96J86 154 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 TMPRSS13Q9BYE2 586 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 RDH8Q9NYR8 311 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 OR1A1Q9P1Q5 309 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 RPUSD1Q9UJJ7 312 aaKnown RBP8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 OR2W1Q9Y3N9 320 aa8.5□□□□□ -1.05
PRPF38A-202ENST00000474048 USF3Q68DE3 2245 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 IGHV3-43A0A0B4J1X8 118 aa8.49□□□□□ -1.05
PRPF38A-202ENST00000474048 RNF212BA8MTL3 300 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms