RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 WASHC3Q9Y3C0 194 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 MAP3K19Q56UN5 1328 aa2.1□□□□□ -2.07
PRPF40A-208ENST00000472760 HSBP1L1C9JCN9 74 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 F5H5T6 163 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 DENRO43583 198 aaKnown RBP2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 SULT1A2P50226 295 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 OR8G1Q15617 311 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 SPIN4Q56A73 249 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 ATP6V1C2Q8NEY4 427 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 RNASEH2CQ8TDP1 164 aaKnown RBP2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 TMEM56Q96MV1 263 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 EBNA1BP2Q99848 306 aaKnown RBP2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 MED10Q9BTT4 135 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 METTL17Q9H7H0 456 aaPredicted RBP2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 TUBA4BQ9H853 241 aa2.09□□□□□ -2.07
PRPF40A-208ENST00000472760 IGKV1-12A0A0C4DH73 117 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 ERICH2A1L162 156 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 A8MWP6 167 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 LIN7AO14910 233 aaPredicted RBP2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 DEDDO75618 318 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 IGKV1D-12P01611 117 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 FBP1P09467 338 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 CTSEP14091 401 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 COILP38432 576 aaPredicted RBP2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 RAB8AP61006 207 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 PSG4Q00888 419 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 XRCC4Q13426 336 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 MAPK14Q16539 360 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 HENMT1Q5T8I9 393 aaKnown RBP2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 HES3Q5TGS1 186 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 EBLN2Q6P2I7 272 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 SPNS3Q6ZMD2 512 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 MTERF4Q7Z6M4 381 aaKnown RBP2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 SELENOHQ8IZQ5 122 aaKnown RBP2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 OR10P1Q8NGE3 313 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 OR5C1Q8NGR4 320 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 ZNRF2Q8NHG8 242 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 DYNC2LI1Q8TCX1 351 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 CD200R1Q8TD46 325 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 GPR119Q8TDV5 335 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 CFAP53Q96M91 514 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 FAM210AQ96ND0 272 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 ACBD6Q9BR61 282 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 UGT2B28Q9BY64 529 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 ASCL3Q9NQ33 180 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 HSPE1-MOB4S4R3N1 261 aa2.08□□□□□ -2.08
PRPF40A-208ENST00000472760 ZNF407Q9C0G0 2248 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 CEP170Q5SW79 1584 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 J3QLI3 93 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 MPZL2O60487 215 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 BRI3O95415 125 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 GADD45AP24522 165 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 KDELR2P33947 212 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 PSMD7P51665 324 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 GTF2BQ00403 316 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 DEFA6Q01524 100 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 ZNF181Q2M3W8 571 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 CENPWQ5EE01 88 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 VN1R4Q7Z5H5 301 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 CHST5Q9GZS9 411 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 C11orf49Q9H6J7 331 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 TMEM216Q9P0N5 145 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 SCML1Q9UN30 329 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 PTPRKQ15262 1439 aa2.07□□□□□ -2.08
PRPF40A-208ENST00000472760 IGSF23A1L1A6 192 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 C17orf98A8MV24 154 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 C9J4A7 227 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 OR4A8P0C604 315 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 PVALBP20472 110 aaPredicted RBP2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 CSRP1P21291 193 aaKnown RBP2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 DLX6P56179 175 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 FAM3AP98173 230 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 PDK2Q15119 407 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 ACSBG2Q5FVE4 666 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 SLC13A5Q86YT5 568 aaPredicted RBP2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 ZNF567Q8N184 647 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 C2orf73Q8N5S3 287 aaPredicted RBP2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 DNAAF3Q8N9W5 541 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 OR5AK3PQ8NH89 298 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 OR5K1Q8NHB7 308 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 LRRC45Q96CN5 670 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 ZNF337Q9Y3M9 751 aa2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 LRPPRCP42704 1394 aaKnown RBP2.06□□□□□ -2.08
PRPF40A-208ENST00000472760 PLXNB1O43157 2135 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 F5H5K5 113 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 H3BSA7 217 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 NPPAP01160 153 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 CRYGDP07320 174 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 AKR1C2P52895 323 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 BSPH1Q075Z2 132 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 EXOC3L4Q17RC7 722 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 DOLPP1Q86YN1 238 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 CRLF3Q8IUI8 442 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 TAMM41Q96BW9 452 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 SLC19A3Q9BZV2 496 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 AICDAQ9GZX7 198 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 GTSF1LQ9H1H1 148 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 CHMP4BQ9H444 224 aaKnown RBP2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 MS4A12Q9NXJ0 267 aa2.05□□□□□ -2.08
PRPF40A-208ENST00000472760 OR51B4Q9Y5P0 310 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms