RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 OR4M1Q8NGD0 313 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 OR10G9Q8NGN4 311 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 GFRA4Q9GZZ7 299 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 USE1Q9NZ43 259 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 IL17CQ9P0M4 197 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SHPKQ9UHJ6 478 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 ANK1P16157 1881 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 IGSF9BQ9UPX0 1349 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 EML5Q05BV3 1969 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 CHD5Q8TDI0 1954 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 NUP210Q8TEM1 1887 aaPredicted RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 MYO5AQ9Y4I1 1855 aaKnown RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 IGHV6-1A0A0B4J1U7 121 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 H3BNH8 94 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 H7C0C1 242 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 INSP01308 110 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 HLA-AP01891 365 aaKnown RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 KRT7P08729 469 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 H2AFZP0C0S5 128 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SLC35G6P0C7Q6 338 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 ZNF883P0CG24 379 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SMIM10L2AP0DMW4 78 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SMIM10L2BP0DMW5 78 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 MAP2K4P45985 399 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 RPS10P46783 165 aaKnown RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 GNB2P62879 340 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 ARG2P78540 354 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 FMODQ06828 376 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SPIN4Q56A73 249 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 CLEC12AQ5QGZ9 265 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SYPL2Q5VXT5 272 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 CLEC19AQ6UXS0 136 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 DGAT2L6Q6ZPD8 337 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 RTL4Q6ZR62 310 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 LINC01551Q86U37 167 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SLC35F6Q8N357 371 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 OR4K17Q8NGC6 315 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 PTX4Q96A99 478 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 ELSPBP1Q96BH3 223 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SMIM8Q96KF7 97 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 OPRPNQ99935 248 aaPredicted RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 FAAP24Q9BTP7 215 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 VCX3BQ9H321 246 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 EXOSC4Q9NPD3 245 aaKnown RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 FAM206AQ9NX38 181 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 ZFYVE26Q68DK2 2539 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 ADAMTS9Q9P2N4 1935 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 CHD7Q9P2D1 2997 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 COL6A6A6NMZ7 2263 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 TRAV39A0A0B4J263 110 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 ZNF850A8MQ14 1090 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 KRBOX1C9JBD0 128 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 DNASE2O00115 360 aaPredicted RBP1.84□□□□□ -2.11
XRN1-210ENST00000472697 SS18L1O75177 396 aaPredicted RBP1.84□□□□□ -2.11
XRN1-210ENST00000472697 MMP23AO75900 390 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 NSA2O95478 260 aaKnown RBP1.84□□□□□ -2.11
XRN1-210ENST00000472697 HLA-DRAP01903 254 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 BGLAPP02818 100 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 CD5P06127 495 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 CDK1P06493 297 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 RPSAP08865 295 aaKnown RBP1.84□□□□□ -2.11
XRN1-210ENST00000472697 CD36P16671 472 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 GCLMP48507 274 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 RPL34P49207 117 aaKnown RBP1.84□□□□□ -2.11
XRN1-210ENST00000472697 SULT1A2P50226 295 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 LHX2P50458 406 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 IDH3GP51553 393 aaPredicted RBP1.84□□□□□ -2.11
XRN1-210ENST00000472697 ELF3P78545 371 aaPredicted RBP1.84□□□□□ -2.11
XRN1-210ENST00000472697 LAMTOR4Q0VGL1 99 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 FAM53BQ14153 422 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 Q1RN00 199 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 SLC36A2Q495M3 483 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 TMEM255AQ5JRV8 349 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 FBXL22Q6P050 247 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 LYPD2Q6UXB3 125 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 RASSF6Q6ZTQ3 369 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 TMUB2Q71RG4 321 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 NAA40Q86UY6 237 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 ZNF440Q8IYI8 595 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 OR6V1Q8N148 313 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 ZNF525Q8N782 197 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 TMEM75Q8N9X5 138 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 TMEM161BQ8NDZ6 487 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 CCDC54Q8NEL0 328 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 NPBQ8NG41 125 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 OR1M1Q8NGA1 313 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 OR1J4Q8NGS1 313 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 OR5AK3PQ8NH89 298 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 STOML3Q8TAV4 291 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 C16orf74Q96GX8 76 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 C1orf147Q96MC9 270 aaPredicted RBP1.84□□□□□ -2.11
XRN1-210ENST00000472697 QKIQ96PU8 341 aaKnown RBP eCLIP1.84□□□□□ -2.113e-6■■■■□ 21.4
XRN1-210ENST00000472697 MED18Q9BUE0 208 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 PAXXQ9BUH6 204 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 EMC6Q9BV81 110 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 PECRQ9BY49 303 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 C8orf17Q9NRJ1 99 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 TMEM9Q9P0T7 183 aa1.84□□□□□ -2.11
XRN1-210ENST00000472697 CFL2Q9Y281 166 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms