RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, human

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIK3-208	ENST00000472648	SLA2	Q9H6Q3	261 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	EGLN3	Q9H6Z9	239 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	EXOSC4	Q9NPD3	245 aa	Known RBP	4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	GPR84	Q9NQS5	396 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	C8orf4	Q9NR00	106 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	IMPAD1	Q9NX62	359 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	CALY	Q9NYX4	217 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	PEMT	Q9UBM1	199 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	A3GALT2	U3KPV4	340 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	NACA	E9PAV3	2078 aa		4.37	□□□□□ -1.71
SIK3-208	ENST00000472648	IGHV7-81	A0A0B4J1V7	117 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	SNTN	A6NMZ2	147 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF785	A8K8V0	405 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF736	B4DX44	427 aa	Predicted RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648		H3BNX3	289 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	EI24	O14681	340 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	SH2D1B	O14796	132 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	TXNL1	O43396	289 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	MITF	O75030	526 aa	Predicted RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ENTPD6	O75354	484 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	DHRS3	O75911	302 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ATP6V1G2	O95670	118 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	OR2H2	O95918	312 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	CYB5A	P00167	134 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	IL1A	P01583	271 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	TRGV3	P03979	118 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	LYN	P07948	512 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF44	P15621	663 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	C21orf33	P30042	268 aa	Predicted RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	GSTT1	P30711	240 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	DAP	P51397	102 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	CRISP1	P54107	249 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	RPS7	P62081	194 aa	Known RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	SCN1B	Q07699	218 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	DYRK1A	Q13627	763 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF146	Q15072	292 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	LGALS9B	Q3B8N2	356 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ZIK1	Q3SY52	487 aa	Predicted RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	MOGAT2	Q3SYC2	334 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ACTBL2	Q562R1	376 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	LPCAT4	Q643R3	524 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	CD300LD	Q6UXZ3	194 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	SLC16A12	Q6ZSM3	486 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	SLC25A26	Q70HW3	274 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF565	Q8N9K5	539 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	SLC37A3	Q8NCC5	494 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	DNAAF1	Q8NEP3	725 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	THEM6	Q8WUY1	208 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	CYGB	Q8WWM9	190 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	COQ2	Q96H96	371 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	APOL4	Q9BPW4	351 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	FUZ	Q9BT04	418 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	GABARAPL1	Q9H0R8	117 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	PPIL3	Q9H2H8	161 aa	Known RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	RBFOX1	Q9NWB1	397 aa	Known RBP	4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	IL20	Q9NYY1	176 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	TVP23B	Q9NYZ1	205 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	RNF150	Q9ULK6	438 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	DHDH	Q9UQ10	334 aa		4.36	□□□□□ -1.71
SIK3-208	ENST00000472648	TRBV2	A0A0J9YWF9	115 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	TMEM269	A0A1B0GVZ9	245 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648		A6NIN4	97 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	ACOD1	A6NK06	481 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	UBE2C	O00762	179 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	AIRE	O43918	545 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	OR2A4	O95047	310 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	CSN2	P05814	226 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648		P0DMU3	169 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	FAM231A	P0DMU4	169 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	FAM231C	P0DMU5	169 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	CALCB	P10092	127 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	CLU	P10909	449 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	CTRB1	P17538	263 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	BCL3	P20749	454 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	HTR1F	P30939	366 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	ATP6V1E1	P36543	226 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	MECP2	P51608	486 aa	Known RBP	4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	MFAP2	P55001	183 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	CRMP1	Q14194	572 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	PTGES3	Q15185	160 aa	Known RBP	4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	MRGPRG-AS1	Q2M3A8	158 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	RPEL1	Q2QD12	228 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	C19orf54	Q5BKX5	351 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	TMEM236	Q5W0B7	351 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	TTC23	Q5W5X9	447 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	TMEM42	Q69YG0	159 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	KDM4D	Q6B0I6	523 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	CTRB2	Q6GPI1	263 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	LIN54	Q6MZP7	749 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	IQCF1	Q8N6M8	205 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	PACRGL	Q8N7B6	248 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	POM121L12	Q8N7R1	296 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	OR52B4	Q8NGK2	314 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	TEAD3	Q99594	435 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	ZNF251	Q9BRH9	671 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	ANKRD60	Q9BZ19	345 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648		Q9H521	79 aa		4.35	□□□□□ -1.71
SIK3-208	ENST00000472648	SMPD3	Q9NY59	655 aa	Predicted RBP	4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms