RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PPP1R27Q86WC6 154 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 DEFB107AQ8IZN7 70 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 HS3ST5Q8IZT8 346 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 OR9G4Q8NGQ1 327 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 DYNLRB2Q8TF09 96 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 SPSB1Q96BD6 273 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 RITA1Q96K30 269 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 RDH12Q96NR8 316 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 DPCDQ9BVM2 203 aaPredicted RBP5.24□□□□□ -1.57
HDAC1-204ENST00000471488 FAM107BQ9H098 131 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 CST11Q9H112 138 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 FBXL15Q9H469 300 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 CLN6Q9NWW5 311 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 SLC2A8Q9NY64 477 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 ADAM30Q9UKF2 790 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 ING4Q9UNL4 249 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 DHDHQ9UQ10 334 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 FBXO7Q9Y3I1 522 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 TNCP24821 2201 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 TRAV24A0A0B4J272 114 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 A0A1W2PQL4 384 aaPredicted RBP5.23□□□□□ -1.57
HDAC1-204ENST00000471488 TMEM30CPA0ZSE6 113 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 FAM90A10PA6NDY2 464 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 OR11H12B2RN74 326 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 NPIPB11E5RHQ5 1161 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 AIPO00170 330 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 TXNL1O43396 289 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 PRKYO43930 277 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 OR7C1O76099 320 aaPredicted RBP5.23□□□□□ -1.57
HDAC1-204ENST00000471488 HLA-DRB1P01911 266 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 CD7P09564 240 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 ZP3P21754 424 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 NDPQ00604 133 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 RAB40BQ12829 278 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 TATDN3Q17R31 274 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 C5orf64Q2M2E5 130 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 CEMP1Q6PRD7 247 aaPredicted RBP5.23□□□□□ -1.57
HDAC1-204ENST00000471488 CD300LDQ6UXZ3 194 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 SLC16A12Q6ZSM3 486 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 SLC25A48Q6ZT89 311 aaKnown RBP5.23□□□□□ -1.57
HDAC1-204ENST00000471488 PRSS35Q8N3Z0 413 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 Q8N402 240 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 SUMF2Q8NBJ7 301 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 MINDY2Q8NBR6 621 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 LFNGQ8NES3 379 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 OR5T1Q8NG75 326 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 OR10A7Q8NGE5 316 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 GRPEL2Q8TAA5 225 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 TNFAIP8L1Q8WVP5 186 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 IL4I1Q96RQ9 567 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 MNTQ99583 582 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 MRPL20Q9BYC9 149 aaKnown RBP5.23□□□□□ -1.57
HDAC1-204ENST00000471488 ADGRL4Q9HBW9 690 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 RANGRFQ9HD47 186 aaPredicted RBP5.23□□□□□ -1.57
HDAC1-204ENST00000471488 GFOD1Q9NXC2 390 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 CNOT2Q9NZN8 540 aaKnown RBP5.23□□□□□ -1.57
HDAC1-204ENST00000471488 ZNF581Q9P0T4 197 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 TRAPPC2LQ9UL33 140 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 RNF150Q9ULK6 438 aa5.23□□□□□ -1.57
HDAC1-204ENST00000471488 MAGEB3O15480 346 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 SPINT2O43291 252 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 XRCC3O43542 346 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 GSTP1P09211 210 aaKnown RBP5.22□□□□□ -1.57
HDAC1-204ENST00000471488 DBTP11182 482 aaKnown RBP5.22□□□□□ -1.57
HDAC1-204ENST00000471488 GZMHP20718 246 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 MNAT1P51948 309 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 DYRK1AQ13627 763 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 KISS1Q15726 138 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 RPEL1Q2QD12 228 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 TMEM244Q5VVB8 128 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 PYHIN1Q6K0P9 492 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 DHFR2Q86XF0 187 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 STX19Q8N4C7 294 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 CCDC54Q8NEL0 328 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 OR51A4Q8NGJ6 313 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 OR4K15Q8NH41 348 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 OR1L1Q8NH94 360 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 C10orf35Q96D05 121 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 MRPS24Q96EL2 167 aaKnown RBP5.22□□□□□ -1.57
HDAC1-204ENST00000471488 PRRG3Q9BZD7 231 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 TPSG1Q9NRR2 321 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 GAB2Q9UQC2 676 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 KIAA1109Q2LD37 5005 aa5.22□□□□□ -1.57
HDAC1-204ENST00000471488 TCRBV5S2A0A599 114 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 H7C2Y5 167 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 FCN1O00602 326 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 DYNC1I1O14576 645 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 CDRT1O95170 752 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 FAM107AO95990 144 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 CSN3P07498 182 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 HTR1AP08908 422 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 SERPINA2P20848 420 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 OR3A3P47888 321 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 ZNF134P52741 427 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 CRISP1P54107 249 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 CX3CL1P78423 397 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 EWSR1Q01844 656 aaKnown RBP eCLIP5.21□□□□□ -1.58
HDAC1-204ENST00000471488 CD300EQ496F6 205 aaPredicted RBP5.21□□□□□ -1.58
HDAC1-204ENST00000471488 CT45A1Q5HYN5 189 aa5.21□□□□□ -1.58
HDAC1-204ENST00000471488 ZNF691Q5VV52 312 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms