RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 LINC00311Q8N616 119 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 ACBD7Q8N6N7 88 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 OR11H1Q8NG94 326 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 RFESDQ8TAC1 157 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 TNFAIP8L1Q8WVP5 186 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 TSEN15Q8WW01 171 aaKnown RBP7.13□□□□□ -1.27
CPSF4-211ENST00000471455 RTN4IP1Q8WWV3 396 aaPredicted RBP7.13□□□□□ -1.27
CPSF4-211ENST00000471455 EME1Q96AY2 570 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 RNFT2Q96EX2 444 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 UBE2E2Q96LR5 201 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 S1PR3Q99500 378 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 CIB1Q99828 191 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 DPCDQ9BVM2 203 aaPredicted RBP7.13□□□□□ -1.27
CPSF4-211ENST00000471455 FAM192AQ9GZU8 254 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 PAK1IP1Q9NWT1 392 aaPredicted RBP7.13□□□□□ -1.27
CPSF4-211ENST00000471455 SCOCQ9UIL1 159 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 DHDHQ9UQ10 334 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 VSIG4Q9Y279 399 aa7.13□□□□□ -1.27
CPSF4-211ENST00000471455 IGHV3-72A0A0B4J1Y9 119 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 OR4C45A6NMZ5 311 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 J3QLW9 94 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 ORC5O43913 435 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 OR7C1O76099 320 aaPredicted RBP7.12□□□□□ -1.27
CPSF4-211ENST00000471455 CSTBP04080 98 aaKnown RBP7.12□□□□□ -1.27
CPSF4-211ENST00000471455 IGF1P05019 195 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 ZNF19P17023 458 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 PSMB8P28062 276 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 CFHR3Q02985 330 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 ZNF616Q08AN1 781 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 ZSCAN26Q16670 478 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 PARP16Q8N5Y8 322 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 OR51A4Q8NGJ6 313 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 OR1N2Q8NGR9 330 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 OR10AC1Q8NH08 325 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 NEK7Q8TDX7 302 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 ARL11Q969Q4 196 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 C4orf36Q96KX1 117 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 KCTD7Q96MP8 289 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 S100A13Q99584 98 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 GHITMQ9H3K2 345 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 IFT22Q9H7X7 185 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 ISYNA1Q9NPH2 558 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 GFOD1Q9NXC2 390 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 ZNF107Q9UII5 783 aaPredicted RBP7.12□□□□□ -1.27
CPSF4-211ENST00000471455 ORC6Q9Y5N6 252 aa7.12□□□□□ -1.27
CPSF4-211ENST00000471455 LCE6AA0A183 80 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 A0A1W2PPE3 182 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 LINC01548A6NM66 108 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 GABRPO00591 440 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 SPINT2O43291 252 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 ZNF780AO75290 641 aaPredicted RBP7.11□□□□□ -1.27
CPSF4-211ENST00000471455 CD2P06729 351 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 PPP3R1P63098 170 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 RUNX1Q01196 453 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 MPV17LQ2QL34 196 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 PIGYQ3MUY2 71 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 NHLRC3Q5JS37 347 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 LPCAT4Q643R3 524 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 SATL1Q86VE3 508 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 SYS1Q8N2H4 156 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 FAM71E2Q8N5Q1 922 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 SUMF2Q8NBJ7 301 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 TMEM104Q8NE00 496 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 OR6Q1Q8NGQ2 317 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 OR5AK2Q8NH90 309 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 PLPPR1Q8TBJ4 325 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 PELI1Q96FA3 418 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 ALG8Q9BVK2 526 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 JAM3Q9BX67 310 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 METTL9Q9H1A3 318 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 OR51J1Q9H342 316 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 SPACA1Q9HBV2 294 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 IL36GQ9NZH8 169 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 GNG12Q9UBI6 72 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 ST3GAL6Q9Y274 331 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 ERGIC3Q9Y282 383 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 AP4S1Q9Y587 144 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 DYNC2H1Q8NCM8 4307 aaKnown RBP7.11□□□□□ -1.27
CPSF4-211ENST00000471455 RYR2Q92736 4967 aa7.11□□□□□ -1.27
CPSF4-211ENST00000471455 AIPO00170 330 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 OVOL1O14753 267 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 SAP30O75446 220 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 ZNF137PP52743 207 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 RBM11P57052 281 aaKnown RBP7.1□□□□□ -1.27
CPSF4-211ENST00000471455 SNRPGP62308 76 aaKnown RBP7.1□□□□□ -1.27
CPSF4-211ENST00000471455 GABPB1Q06547 395 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-211ENST00000471455 MMDQ15546 238 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 SLC25A30Q5SVS4 291 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 C6orf183Q5T699 404 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 TRAT1Q6PIZ9 186 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 SLC25A48Q6ZT89 311 aaKnown RBP7.1□□□□□ -1.27
CPSF4-211ENST00000471455 MYOZ3Q8TDC0 251 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 ST6GALNAC6Q969X2 333 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 ISOC1Q96CN7 298 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 HSPB9Q9BQS6 159 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 PLSCR3Q9NRY6 295 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 FAM53CQ9NYF3 392 aa7.1□□□□□ -1.27
CPSF4-211ENST00000471455 MRPS28Q9Y2Q9 187 aaKnown RBP7.1□□□□□ -1.27
CPSF4-211ENST00000471455 TRAV39A0A0B4J263 110 aa7.09□□□□□ -1.27
CPSF4-211ENST00000471455 C15orf65H3BRN8 121 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms