RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TMEM267Q0VDI3 215 aaPredicted RBP6.84□□□□□ -1.31
XRN1-208ENST00000470537 DIAPH2-AS1Q14236 149 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 IL13RA2Q14627 380 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 CDK5R1Q15078 307 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 KISS1Q15726 138 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 SRSF7Q16629 238 aaKnown RBP eCLIP6.84□□□□□ -1.31
XRN1-208ENST00000470537 ELP2Q6IA86 826 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 PYHIN1Q6K0P9 492 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 ANKRD13BQ86YJ7 626 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 SERPINA12Q8IW75 414 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 AQP12AQ8IXF9 295 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 TCTEX1D1Q8N7M0 179 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 TMEM104Q8NE00 496 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 PXT1Q8NFP0 134 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 OR10H4Q8NGA5 316 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 OR5D18Q8NGL1 313 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 DLX4Q92988 240 aaPredicted RBP6.84□□□□□ -1.31
XRN1-208ENST00000470537 RFT1Q96AA3 541 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 MRPL48Q96GC5 212 aaKnown RBP6.84□□□□□ -1.31
XRN1-208ENST00000470537 NR1H4Q96RI1 486 aaPredicted RBP6.84□□□□□ -1.31
XRN1-208ENST00000470537 MBOAT4Q96T53 435 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 TBX5Q99593 518 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 FAM107BQ9H098 131 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 TUBA4BQ9H853 241 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 GNG8Q9UK08 70 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 RNF150Q9ULK6 438 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 STUB1Q9UNE7 303 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 ARL2BPQ9Y2Y0 163 aa6.84□□□□□ -1.31
XRN1-208ENST00000470537 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.32
XRN1-208ENST00000470537 TRAV41A0A0B4J266 112 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 TMEM30CPA0ZSE6 113 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 FAM90A10PA6NDY2 464 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 TRIM64CA6NLI5 447 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 H0Y980 276 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 SDCBPO00560 298 aaPredicted RBP6.83□□□□□ -1.32
XRN1-208ENST00000470537 ORC5O43913 435 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 HSPB1P04792 205 aaKnown RBP6.83□□□□□ -1.32
XRN1-208ENST00000470537 SSTR5P35346 364 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 CCR9P51686 369 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 EFNB1P98172 346 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 MS4A2Q01362 244 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 RSU1Q15404 277 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 MMDQ15546 238 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 RSBN1Q5VWQ0 802 aaPredicted RBP6.83□□□□□ -1.32
XRN1-208ENST00000470537 TMEM179BQ7Z7N9 219 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 GTSCR1Q86UQ5 136 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 PRSS35Q8N3Z0 413 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 STX19Q8N4C7 294 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 OR13C3Q8NGS6 347 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 OR2G2Q8NGZ5 317 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 RNF141Q8WVD5 230 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 CANT1Q8WVQ1 401 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 ARL11Q969Q4 196 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 OR5B12Q96R08 314 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 IL4I1Q96RQ9 567 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 HSPB9Q9BQS6 159 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 ZNF251Q9BRH9 671 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 JAM3Q9BX67 310 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 CST11Q9H112 138 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 KLK15Q9H2R5 256 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 GNB4Q9HAV0 340 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 ARL8BQ9NVJ2 186 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 PAK1IP1Q9NWT1 392 aaPredicted RBP6.83□□□□□ -1.32
XRN1-208ENST00000470537 KIAA1456Q9P272 454 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 MYRFQ9Y2G1 1151 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 WSB1Q9Y6I7 421 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 LYSTQ99698 3801 aa6.83□□□□□ -1.32
XRN1-208ENST00000470537 TRAV24A0A0B4J272 114 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 A0A1W2PPE3 182 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 MAGEA13PA6NCF6 341 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 SPINT2O43291 252 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 HLA-DRB1P01911 266 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 ARSBP15848 533 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 ZNF137PP52743 207 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 F2RL1P55085 397 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 GNB1P62873 340 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 SRSF3P84103 164 aaKnown RBP6.82□□□□□ -1.32
XRN1-208ENST00000470537 KIAA0141Q14154 515 aaPredicted RBP6.82□□□□□ -1.32
XRN1-208ENST00000470537 UTF1Q5T230 341 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 LIN54Q6MZP7 749 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 SLC25A48Q6ZT89 311 aaKnown RBP6.82□□□□□ -1.32
XRN1-208ENST00000470537 SSX6Q7RTT6 188 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 LINC00596Q86U02 117 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 ADGRG5Q8IZF4 528 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 HS3ST5Q8IZT8 346 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 OR13C9Q8NGT0 318 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 ARPC1AQ92747 370 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 NSL1Q96IY1 281 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 SPACA5Q96QH8 159 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 GPER1Q99527 375 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 S100A13Q99584 98 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 DPCDQ9BVM2 203 aaPredicted RBP6.82□□□□□ -1.32
XRN1-208ENST00000470537 TOLLIPQ9H0E2 274 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 GFOD1Q9NXC2 390 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 GNG12Q9UBI6 72 aa6.82□□□□□ -1.32
XRN1-208ENST00000470537 HUWE1Q7Z6Z7 4374 aaKnown RBP6.82□□□□□ -1.32
XRN1-208ENST00000470537 SNTNA6NMZ2 147 aa6.81□□□□□ -1.32
XRN1-208ENST00000470537 SULT1B1O43704 296 aa6.81□□□□□ -1.32
XRN1-208ENST00000470537 ZNF780AO75290 641 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms