RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 HMGN3Q15651 99 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 PNLIPRP3Q17RR3 467 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 ZNF260Q3ZCT1 412 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 HACD4Q5VWC8 232 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 ZNF626Q68DY1 528 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 MZT2AQ6P582 158 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 BRD3OSQ6XYD6 125 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 PIP4P2Q8N4L2 257 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 ARL11Q969Q4 196 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 S100A16Q96FQ6 103 aaKnown RBP12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 HDHD3Q9BSH5 251 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 TAF9BQ9HBM6 251 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 DIABLOQ9NR28 239 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 IDI2-AS1Q9NZ38 188 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 COMMD3Q9UBI1 195 aa12.17□□□□□ -0.46
CDC42SE1-203ENST00000470278 IGHV3OR16-10A0A075B7F0 116 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 SPINT2O43291 252 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 CD3GP09693 182 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 DTYMKP23919 212 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 COX7A1P24310 79 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 SAA4P35542 130 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 MRPS15P82914 257 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 PITPNAQ00169 270 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 SRSF7Q16629 238 aaKnown RBP eCLIP12.16□□□□□ -0.466e-6■■■□□ 15.5
CDC42SE1-203ENST00000470278 Q3ZCU0 254 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 CDNFQ49AH0 187 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 RUSC1-AS1Q66K80 236 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 Q6ZS49 121 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 PNKDQ8N490 385 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 CLEC7AQ9BXN2 247 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 SLIRPQ9GZT3 109 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 MS4A7Q9GZW8 240 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 PRDM13Q9H4Q3 707 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 ZMAT3Q9HA38 289 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 Q9N2K0 584 aa12.16□□□□□ -0.46
CDC42SE1-203ENST00000470278 A0A075B6Q4 140 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 HBZP02008 142 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 EIF4EP06730 217 aaKnown RBP12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 MELTFP08582 738 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 FCGR3AP08637 254 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 LOXL3P58215 753 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 HTD2P86397 168 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 PDZD9Q8IXQ8 264 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 C8orf31Q8N9H6 132 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 BEND2Q8NDZ0 799 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 RFESDQ8TAC1 157 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 SLC6A7Q99884 636 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 SUCNR1Q9BXA5 334 aa12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 TBL2Q9Y4P3 447 aaKnown RBP12.15□□□□□ -0.46
CDC42SE1-203ENST00000470278 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 TMEM235A6NFC5 223 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 SDCBPO00560 298 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 HPGDSO60760 199 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 DIRAS3O95661 229 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 IGLV1-47P01700 117 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 HLA-DRB3P79483 266 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 ARFRP1Q13795 201 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 STEAP3Q658P3 488 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 BAIAP2L2Q6UXY1 529 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 BCL6BQ8N143 479 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 ABHD12Q8N2K0 398 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 ZNF596Q8TC21 504 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 C22orf15Q8WYQ4 148 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 GALMQ96C23 342 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 NXF2Q9GZY0 626 aaKnown RBP12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 AUNIPQ9H7T9 357 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 ZNF286AQ9HBT8 521 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 JPT1Q9UK76 154 aa12.14□□□□□ -0.47
CDC42SE1-203ENST00000470278 A0A0A6YYJ9 748 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 A0A0U1RQK1 487 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 MEIOCA2RUB1 952 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 DPPA5A6NC42 116 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 TPPPO94811 219 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 ARG1P05089 322 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 FBP1P09467 338 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 ELK1P19419 428 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 NFYBP25208 207 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 TALDO1P37837 337 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 MNDAP41218 407 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 KIR2DS4P43632 304 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 TAS2R20P59543 309 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 GNG2P59768 71 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 KIR2DS1Q14954 304 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 HLA-DRB5Q30154 266 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 LY6G6FQ5SQ64 297 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 MINOS1Q5TGZ0 78 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 LDLRAD3Q86YD5 345 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 OR4P4Q8NGL7 312 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 OR1L1Q8NH94 360 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 SETD6Q8TBK2 473 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 CREB3L1Q96BA8 519 aa12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 DGCR14Q96DF8 476 aaKnown RBP12.13□□□□□ -0.47
CDC42SE1-203ENST00000470278 AJUBAQ96IF1 538 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms