RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 OR4D10Q8NGI6 311 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 OR10R2Q8NGX6 335 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 IL17DQ8TAD2 202 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 DYRK2Q92630 601 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ARHGAP5-AS1Q96IT6 56 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CMTM3Q96MX0 182 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 GAFA1Q96PS6 74 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 FYTTD1Q96QD9 318 aaKnown RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CCL13Q99616 98 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 SULT4A1Q9BR01 284 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 BPESC1Q9GZL8 116 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 CHST6Q9GZX3 395 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 RHOFQ9HBH0 211 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 RASL12Q9NYN1 266 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 RCC2Q9P258 522 aaKnown RBP3.92□□□□□ -1.78
SF3B1-208ENST00000470268 DNAJB11Q9UBS4 358 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 FLVCR2Q9UPI3 526 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 PDZD2O15018 2839 aa3.92□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF469Q96JG9 3925 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 SPG11Q96JI7 2443 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 TRAV18A0A075B6X5 111 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 IGHV4-30-2A0A087WSY4 118 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 TRAV38-1A0A0B4J264 116 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 LOC105371267A0A1B0GV96 52 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 FAM240BA0A1B0GVZ2 78 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM235A6NFC5 223 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 CEACAM18A8MTB9 384 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 F5H697 171 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 MFNGO00587 321 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 PPIHO43447 177 aaKnown RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 XRCC3O43542 346 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 PDCD6O75340 191 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 FSTL3O95633 263 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF44P15621 663 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 GABRA2P47869 451 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 INPP1P49441 399 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 CAPZA1P52907 286 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 SEC61A1P61619 476 aaKnown RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 COL10A1Q03692 680 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 KLF9Q13886 244 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 IL13RA2Q14627 380 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 TATDN3Q17R31 274 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 MPV17LQ2QL34 196 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF260Q3ZCT1 412 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 CD300EQ496F6 205 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM69Q5SWH9 247 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 ATAD3CQ5T2N8 411 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 ATPAF1Q5TC12 328 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 RAB12Q6IQ22 244 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 PYHIN1Q6K0P9 492 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF841Q6ZN19 808 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 SUMF2Q8NBJ7 301 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 BEST4Q8NFU0 473 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 OR4S1Q8NGB4 309 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 OR56B1Q8NGI3 324 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 SETD6Q8TBK2 473 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 ENKURQ8TC29 256 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 C10orf105Q8TEF2 133 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 RAB40AQ8WXH6 277 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 S100A16Q96FQ6 103 aaKnown RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 SDSLQ96GA7 329 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 HDHD3Q9BSH5 251 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 URM1Q9BTM9 101 aaKnown RBP3.91□□□□□ -1.78
SF3B1-208ENST00000470268 FAAP24Q9BTP7 215 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 PECRQ9BY49 303 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 NARFLQ9H6Q4 476 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 PCDHB16Q9NRJ7 776 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 ALG5Q9Y673 324 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 POLQO75417 2590 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 UNC79Q9P2D8 2635 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 DYSFO75923 2080 aa3.91□□□□□ -1.78
SF3B1-208ENST00000470268 A0A096LNT2 108 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 MEX3AA1L020 520 aaKnown RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 METTL21EPA6NDL7 271 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A10PA6NDY2 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A18PA6NE21 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A16PA6NEW6 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A20PA6NIJ5 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A8PA6NJQ4 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A7PA6NKC0 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A22PA8MWA6 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A12PA8MX19 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A5PA8MXJ8 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A23PA8MXZ1 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 VWC2LB2RUY7 222 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 IFNL4K9M1U5 179 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 SH2D1BO14796 132 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 DEGS1O15121 323 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 SIGLEC5O15389 551 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 CHRM2P08172 466 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A15PP0C7V4 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A13PP0C7W8 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A14PP0C7W9 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FAM90A24PP0C7X0 464 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 HIST1H1DP16402 221 aaKnown RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 FUT3P21217 361 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 DNASE1P24855 282 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 ZFP36P26651 326 aaKnown RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 SLC6A1P30531 599 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 IL2RGP31785 369 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms