RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 H1FOOQ8IZA3 346 aaPredicted RBP6.8□□□□□ -1.32
SMC4-212ENST00000470240 CLEC18CQ8NCF0 446 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 ZBTB34Q8NCN2 500 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 OR2G3Q8NGZ4 309 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 LILRB1Q8NHL6 650 aaPredicted RBP6.8□□□□□ -1.32
SMC4-212ENST00000470240 MRPL30Q8TCC3 161 aaKnown RBP6.8□□□□□ -1.32
SMC4-212ENST00000470240 SCGB1C1Q8TD33 95 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 IL1F10Q8WWZ1 152 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 NINJ1Q92982 152 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 ERGIC1Q969X5 290 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 RHOVQ96L33 236 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 TRIB1Q96RU8 372 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 BCL2L14Q9BZR8 327 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 OBP2BQ9NPH6 170 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 CCL28Q9NRJ3 127 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 MBNL3Q9NUK0 354 aaKnown RBP6.8□□□□□ -1.32
SMC4-212ENST00000470240 DLL3Q9NYJ7 618 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 TAAR3PQ9P1P4 343 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 RNF150Q9ULK6 438 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 FAM96BQ9Y3D0 163 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 LIPGQ9Y5X9 500 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 R4GN57 208 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 A0A1W2PNU3 283 aaPredicted RBP6.79□□□□□ -1.32
SMC4-212ENST00000470240 TMEM30CPA0ZSE6 113 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 M0R036 132 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 AQP7O14520 342 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 PGLYRP1O75594 196 aaPredicted RBP6.79□□□□□ -1.32
SMC4-212ENST00000470240 SCAF4O95104 1147 aaKnown RBP6.79□□□□□ -1.32
SMC4-212ENST00000470240 IGHG3P01860 377 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 CD5P06127 495 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 ADCYAP1P18509 176 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 GCH1P30793 250 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 SNCAP37840 140 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 TNFSF10P50591 281 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 IDH3GP51553 393 aaPredicted RBP6.79□□□□□ -1.32
SMC4-212ENST00000470240 ARHGDIBP52566 201 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 FOXG1P55316 489 aaPredicted RBP6.79□□□□□ -1.32
SMC4-212ENST00000470240 POLR2GP62487 172 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMC4-212ENST00000470240 CATR1Q13166 79 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 CLINT1Q14677 625 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 TGIF1Q15583 401 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 MSMO1Q15800 293 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 GUCA2BQ16661 112 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 GUK1Q16774 197 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 NMSQ5H8A3 153 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 SPATA46Q5T0L3 261 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 AVPI1Q5T686 147 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 ZNF880Q6PDB4 577 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 TRAT1Q6PIZ9 186 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 TMEM182Q6ZP80 229 aaPredicted RBP6.79□□□□□ -1.32
SMC4-212ENST00000470240 Q6ZT83 130 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 C17orf78Q8N4C9 275 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 C15orf54Q8N8G6 183 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 CNEP1R1Q8N9A8 125 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 SUMF1Q8NBK3 374 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 DMBX1Q8NFW5 382 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 OR1J1Q8NGS3 322 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 OR10Z1Q8NGY1 313 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 LYPD6BQ8NI32 183 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 FAM213BQ8TBF2 198 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 LSM10Q969L4 123 aaKnown RBP6.79□□□□□ -1.32
SMC4-212ENST00000470240 RBMXL1Q96E39 390 aaKnown RBP6.79□□□□□ -1.32
SMC4-212ENST00000470240 CYYR1Q96J86 154 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 ATP5SQ99766 215 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 TLNRD1Q9H1K6 362 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 SPRR3Q9UBC9 169 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 CLCF1Q9UBD9 225 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 CACFD1Q9UGQ2 172 aa6.79□□□□□ -1.32
SMC4-212ENST00000470240 TRAV24A0A0B4J272 114 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 IGKV1D-13A0A0B4J2D9 117 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 A0A1B0GW64 132 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 ZNF503-AS2A6NEH8 195 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 FAM24AA6NFZ4 105 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 A6NLC8 198 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 SIRPB1O00241 398 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 TIMM8AO60220 97 aaPredicted RBP6.78□□□□□ -1.32
SMC4-212ENST00000470240 OR2H2O95918 312 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 ACAA1P09110 424 aaPredicted RBP6.78□□□□□ -1.32
SMC4-212ENST00000470240 PGA5P0DJD9 388 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 IGKV1-13P0DP09 117 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 CBR1P16152 277 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 ZNF14P17017 642 aaPredicted RBP6.78□□□□□ -1.32
SMC4-212ENST00000470240 OMGP23515 440 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 PAX6P26367 422 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 IL2RGP31785 369 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 CCL11P51671 97 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 RAB5BP61020 215 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 NHLH2Q02577 135 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 HERPUD1Q15011 391 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 ZNF146Q15072 292 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 RHEBQ15382 184 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 EIF2S3LQ2VIR3 472 aaKnown RBP6.78□□□□□ -1.32
SMC4-212ENST00000470240 ZNF718Q3SXZ3 478 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 ZNF324BQ6AW86 544 aaPredicted RBP6.78□□□□□ -1.32
SMC4-212ENST00000470240 TMEM252Q8N6L7 170 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 SCCPDHQ8NBX0 429 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 OR5C1Q8NGR4 320 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 OR8U1Q8NH10 309 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 OR51H1Q8NH63 302 aa6.78□□□□□ -1.32
SMC4-212ENST00000470240 SLC25A40Q8TBP6 338 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms