RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 RNLSQ5VYX0 342 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 WDR25Q64LD2 544 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-208ENST00000469585 TMEM42Q69YG0 159 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 SPSB3Q6PJ21 355 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 ACP7Q6ZNF0 438 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 BTN2A1Q7KYR7 527 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 LINC00596Q86U02 117 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 ANGPTL5Q86XS5 388 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 FAM58AQ8N1B3 248 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 C19orf18Q8NEA5 215 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 OR5T2Q8NGG2 359 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 OR52I2Q8NH67 350 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 NEK7Q8TDX7 302 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 TNFAIP8L1Q8WVP5 186 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 HPSE2Q8WWQ2 592 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 TMEM158Q8WZ71 300 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 PHYHIPQ92561 330 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 ABHD1Q96SE0 405 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 CCL13Q99616 98 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 TMED9Q9BVK6 235 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 CDCA4Q9BXL8 241 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 CST11Q9H112 138 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 GAL3ST2Q9H3Q3 398 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 KCNK15Q9H427 330 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 HEXA-AS1Q9H8Q6 139 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 SPACA1Q9HBV2 294 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 ACOT13Q9NPJ3 140 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 NUP50Q9UKX7 468 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 ING4Q9UNL4 249 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 FOXJ3Q9UPW0 622 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 GSTK1Q9Y2Q3 226 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 KPTNQ9Y664 436 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 TANC2Q9HCD6 1990 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 RTTNQ86VV8 2226 aa5.11□□□□□ -1.59
PTCD3-208ENST00000469585 FLNAP21333 2647 aaKnown RBP5.1□□□□□ -1.59
PTCD3-208ENST00000469585 A0A096LNT2 108 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 TRGV10A0A0A0MS01 117 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 KIR2DS1A0A191URI9 304 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 C5orf63A6NC05 138 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 PRR32B1ATL7 298 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 E9PQ18 207 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 DEGS1O15121 323 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 SIGLEC5O15389 551 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 NOS1APO75052 506 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-208ENST00000469585 RHBDL1O75783 438 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 TNFAIP8O95379 198 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 HAND1O96004 215 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 LHBP01229 141 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 ALDOBP05062 364 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 UBBP0CG47 229 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 GTF2F2P13984 249 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 MPZP25189 248 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 PSMB9P28065 219 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 TGFBR2P37173 567 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 GTF2A1P52655 376 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-208ENST00000469585 CD81P60033 236 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 ACSM1Q08AH1 577 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 MLLT11Q13015 90 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-208ENST00000469585 GAGE2BQ13066 116 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 PDZK1IP1Q13113 114 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 RBM39Q14498 530 aaKnown RBP5.1□□□□□ -1.59
PTCD3-208ENST00000469585 UBE2V2Q15819 145 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 GRK1Q15835 563 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 TIMM50Q3ZCQ8 353 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 GAGE2EQ4V326 116 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 HSD17B12Q53GQ0 312 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 IGSF11Q5DX21 431 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 TMEM255AQ5JRV8 349 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 FAM201AQ5SY85 155 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 GAGE2AQ6NT46 116 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 Q6ZSR3 168 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 KRT74Q7RTS7 529 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 CDH26Q8IXH8 852 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 KIR3DL3Q8N743 410 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF565Q8N9K5 539 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 OR4D6Q8NGJ1 314 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 OR5D18Q8NGL1 313 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 CAPSLQ8WWF8 208 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 RFT1Q96AA3 541 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 PHF21AQ96BD5 680 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 ADAT3Q96EY9 351 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-208ENST00000469585 NRIP2Q9BQI9 281 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 NEURL2Q9BR09 285 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 BARHL1Q9BZE3 327 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 METTL8Q9H825 291 aaKnown RBP5.1□□□□□ -1.59
PTCD3-208ENST00000469585 PLGRKTQ9HBL7 147 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 ISYNA1Q9NPH2 558 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 TAS2R4Q9NYW5 299 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 GHRLQ9UBU3 117 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 GAGE2DQ9UEU5 116 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 RPUSD1Q9UJJ7 312 aaKnown RBP5.1□□□□□ -1.59
PTCD3-208ENST00000469585 INSIG2Q9Y5U4 225 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 OTOGQ6ZRI0 2925 aa5.1□□□□□ -1.59
PTCD3-208ENST00000469585 TRAV40A0A0B4J280 105 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 M0R1W7 72 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 DENRO43583 198 aaKnown RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SPRY1O43609 319 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 SYNGR1O43759 233 aa5.09□□□□□ -1.59
PTCD3-208ENST00000469585 CRTAPO75718 401 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-208ENST00000469585 MAS1P04201 325 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms