RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 CDNFQ49AH0 187 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 UTF1Q5T230 341 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 OLFML2AQ68BL7 652 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 Q6YL49 198 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 Q6ZPA2 131 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 PRR18Q8N4B5 295 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 UBALD1Q8TB05 177 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 ZNF596Q8TC21 504 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 PHF21AQ96BD5 680 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 AJUBAQ96IF1 538 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 ZNF286AQ9HBT8 521 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 C12orf4Q9NQ89 552 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 TBL2Q9Y4P3 447 aaKnown RBP9.71□□□□□ -0.86
VPS13D-204ENST00000469054 CEPT1Q9Y6K0 416 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 CUBNO60494 3623 aa9.71□□□□□ -0.86
VPS13D-204ENST00000469054 A0A0A6YYH2 397 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 A6NJ64 397 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 SDCBPO00560 298 aaPredicted RBP9.7□□□□□ -0.86
VPS13D-204ENST00000469054 TOR1AO14656 332 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 NOL3O60936 208 aaKnown RBP9.7□□□□□ -0.86
VPS13D-204ENST00000469054 VENTXO95231 258 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 IGLV1-47P01700 117 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 HBZP02008 142 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 ZNF182P17025 639 aaPredicted RBP9.7□□□□□ -0.86
VPS13D-204ENST00000469054 PRRX1P54821 245 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 LOXL3P58215 753 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 MRPS15P82914 257 aaKnown RBP9.7□□□□□ -0.86
VPS13D-204ENST00000469054 BAMBIQ13145 260 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 SPCS2Q15005 226 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 HMGN3Q15651 99 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 MINOS1Q5TGZ0 78 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 MOB1BQ7L9L4 216 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 LHFPL4Q7Z7J7 247 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 ZDHHC22Q8N966 263 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 BEND2Q8NDZ0 799 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 OR4P4Q8NGL7 312 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 OR9G1Q8NH87 305 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 OR1L1Q8NH94 360 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 SETD6Q8TBK2 473 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 C17orf50Q8WW18 174 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 ACOT12Q8WYK0 555 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 ABCG5Q9H222 651 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 Q9N2K0 584 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 ESM1Q9NQ30 184 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS13D-204ENST00000469054 DIABLOQ9NR28 239 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 GFOD1Q9NXC2 390 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 MGAT4AQ9UM21 535 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 PSG11Q9UQ72 335 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 MINOS1-NBL1R4GNA1 71 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 JMJD1CQ15652 2540 aa9.7□□□□□ -0.86
VPS13D-204ENST00000469054 IGHV3-43A0A0B4J1X8 118 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 J3QR06 171 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 IGHV3-7P01780 117 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 MELTFP08582 738 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 GSTP1P09211 210 aaKnown RBP9.69□□□□□ -0.86
VPS13D-204ENST00000469054 IGHV3-43DP0DP04 118 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 HTR1DP28221 377 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 ARFRP1Q13795 201 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 HLA-DRB5Q30154 266 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 TMEM30BQ3MIR4 351 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 ZNF260Q3ZCT1 412 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 Q3ZCU0 254 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 C2CD3Q4AC94 2353 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 UBE2NLQ5JXB2 153 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 LDLRAD2Q5SZI1 272 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 HACD4Q5VWC8 232 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 MZT2AQ6P582 158 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 C5orf24Q7Z6I8 188 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 LDLRAD3Q86YD5 345 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 SAMD12Q8N8I0 201 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 AP3S1Q92572 193 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 CREB3L1Q96BA8 519 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 GALMQ96C23 342 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 ISOC1Q96CN7 298 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 MALSU1Q96EH3 234 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 S100A16Q96FQ6 103 aaKnown RBP9.69□□□□□ -0.86
VPS13D-204ENST00000469054 CMTM3Q96MX0 182 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 SETD2Q9BYW2 2564 aaPredicted RBP9.69□□□□□ -0.86
VPS13D-204ENST00000469054 MEGF9Q9H1U4 602 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 OR2S2Q9NQN1 319 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 ZNRD1Q9P1U0 126 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 DPM3Q9P2X0 92 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 COMMD3Q9UBI1 195 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 GNG12Q9UBI6 72 aa9.69□□□□□ -0.86
VPS13D-204ENST00000469054 ELF5Q9UKW6 265 aaPredicted RBP9.69□□□□□ -0.86
VPS13D-204ENST00000469054 KIAA2026Q5HYC2 2103 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 TRAV18A0A075B6X5 111 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 TMEM235A6NFC5 223 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 DNAJC9-AS1A6NH13 148 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 LEUTXA8MZ59 168 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 H3BMQ9 156 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 CLDN34H7C241 214 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 TRIM77I1YAP6 450 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 HOXA3O43365 443 aaPredicted RBP9.68□□□□□ -0.86
VPS13D-204ENST00000469054 XRCC3O43542 346 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 SOX6P35712 828 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 TALDO1P37837 337 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 GNG10P50151 68 aa9.68□□□□□ -0.86
VPS13D-204ENST00000469054 HTD2P86397 168 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms