RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 HNRNPA1L2Q32P51 320 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 ABCA11PQ4W5N1 156 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 DCST2Q5T1A1 773 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 STUMQ69YW2 141 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 MFSD12Q6NUT3 480 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF880Q6PDB4 577 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PSRC1Q6PGN9 363 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PARS2Q7L3T8 475 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 FA2HQ7L5A8 372 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 SYT13Q7L8C5 426 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 MOB1BQ7L9L4 216 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM144Q7Z5S9 345 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 BAGE3Q86Y29 109 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 BAGE2Q86Y30 109 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 LYPD6Q86Y78 171 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A1Q86YD7 464 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 LINC00346Q8IVM7 164 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 ZFP62Q8NB50 900 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 SLC16A11Q8NCK7 471 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 OR4P4Q8NGL7 312 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 OR2Y1Q8NGV0 311 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PFN4Q8NHR9 129 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PLPPR1Q8TBJ4 325 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 SLC25A40Q8TBP6 338 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 VN1R17PQ8TDU5 208 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 DOK4Q8TEW6 326 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 FAM222BQ8WU58 562 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 OR5P3Q8WZ94 311 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 FGF14Q92915 247 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 IL22RA2Q969J5 263 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PERPQ96FX8 193 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 FER1L6-AS2Q96M78 137 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 SDF2Q99470 211 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 HSPB9Q9BQS6 159 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 C16orf70Q9BSU1 422 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 C1orf43Q9BWL3 253 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PHF7Q9BWX1 381 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 GNB1LQ9BYB4 327 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 SMIM3Q9BZL3 60 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 VCX2Q9H322 139 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 ZDHHC6Q9H6R6 413 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 NAA60Q9H7X0 242 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 CALHM2Q9HA72 323 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PATZ1Q9HBE1 687 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 C20orf141Q9NUB4 165 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 C1RLQ9NZP8 487 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 LY96Q9Y6Y9 160 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 R4GMQ9 66 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 NLRC5Q86WI3 1866 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 PLXNA4Q9HCM2 1894 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 HEATR5AQ86XA9 2040 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 TRAV27A0A087WT01 109 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM189A5PLL7 270 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 DPRXA6NFQ7 191 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 GAGE10A6NGK3 116 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 LIPT2A6NK58 231 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 C22orf46C9J442 243 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 SAP18O00422 153 aaKnown RBP4.18□□□□□ -1.74
SF3B1-207ENST00000468925 TNFSF14O43557 240 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 SLC25A17O43808 307 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 B3GAT3O94766 335 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 NUDT3O95989 172 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 HLA-DQA2P01906 255 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 GYPBP06028 91 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 H2BFMP0C1H6 154 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 GNB3P16520 340 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 FUT1P19526 365 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 RPS12P25398 132 aaKnown RBP4.18□□□□□ -1.74
SF3B1-207ENST00000468925 GDF1P27539 372 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 NKX2-1P43699 371 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-207ENST00000468925 LGALS7P47929 136 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 TFPI2P48307 235 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 HBG1P69891 147 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 HBG2P69892 147 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 CCL7P80098 99 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 SSBP2P81877 361 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-207ENST00000468925 QRFPP83859 136 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 RAB31Q13636 194 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 ARFRP1Q13795 201 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 ITPRIPL2Q3MIP1 535 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 WDR38Q5JTN6 314 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 MRPL2Q5T653 305 aaKnown RBP4.18□□□□□ -1.74
SF3B1-207ENST00000468925 STPG1Q5TH74 334 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 C1orf140Q5VVS0 124 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 CST9LP1Q5W188 147 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF776Q68DI1 518 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-207ENST00000468925 RASL11AQ6T310 242 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 RFLNAQ6ZTI6 216 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 Q6ZWC4 215 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 LRP11Q86VZ4 500 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 TUSC5Q8IXB3 177 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 LRRC25Q8N386 305 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-207ENST00000468925 ZIC4Q8N9L1 334 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 FER1L6-AS1Q8NA97 138 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 SCCPDHQ8NBX0 429 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 OR10G3Q8NGC4 313 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 OR51A4Q8NGJ6 313 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 ASB10Q8WXI3 467 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 C18orf12Q96KH6 178 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 RAB40CQ96S21 281 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms