RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 PEX16Q9Y5Y5 336 aa17.26■□□□□ 0.35
TTC28-204ENST00000468807 FGF16O43320 207 aa17.25■□□□□ 0.35
TTC28-204ENST00000468807 CRTAPO75718 401 aaPredicted RBP17.25■□□□□ 0.35
TTC28-204ENST00000468807 WNT4P56705 351 aa17.25■□□□□ 0.35
TTC28-204ENST00000468807 DOC2BQ14184 412 aa17.25■□□□□ 0.35
TTC28-204ENST00000468807 LAIR2Q6ISS4 152 aa17.25■□□□□ 0.35
TTC28-204ENST00000468807 SLC35E3Q7Z769 313 aa17.25■□□□□ 0.35
TTC28-204ENST00000468807 OR10V1Q8NGI7 309 aa17.25■□□□□ 0.35
TTC28-204ENST00000468807 CHPT1Q8WUD6 406 aa17.25■□□□□ 0.35
TTC28-204ENST00000468807 MRPS24Q96EL2 167 aaKnown RBP17.25■□□□□ 0.35
TTC28-204ENST00000468807 RCC2Q9P258 522 aaKnown RBP17.25■□□□□ 0.35
TTC28-204ENST00000468807 C12orf77C9JDV5 145 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 SPINT2O43291 252 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 MGMTP16455 207 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 VHLP40337 213 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 LOXL3P58215 753 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 FOXRED2Q8IWF2 684 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 LINC00311Q8N616 119 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 FAM46BQ96A09 425 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 EAF1Q96JC9 268 aaPredicted RBP17.24■□□□□ 0.35
TTC28-204ENST00000468807 RAB9BQ9NP90 201 aa17.24■□□□□ 0.35
TTC28-204ENST00000468807 SLC31A2O15432 143 aa17.23■□□□□ 0.35
TTC28-204ENST00000468807 MAPK3P27361 379 aaPredicted RBP17.23■□□□□ 0.35
TTC28-204ENST00000468807 SLC35B1P78383 322 aa17.23■□□□□ 0.35
TTC28-204ENST00000468807 C6orf183Q5T699 404 aa17.23■□□□□ 0.35
TTC28-204ENST00000468807 OGFRL1Q5TC84 451 aaPredicted RBP17.23■□□□□ 0.35
TTC28-204ENST00000468807 TMEM104Q8NE00 496 aa17.23■□□□□ 0.35
TTC28-204ENST00000468807 OR2T10Q8NGZ9 312 aa17.23■□□□□ 0.35
TTC28-204ENST00000468807 RTN4IP1Q8WWV3 396 aaPredicted RBP17.23■□□□□ 0.35
TTC28-204ENST00000468807 VCXQ9H320 206 aa17.23■□□□□ 0.35
TTC28-204ENST00000468807 ERGIC3Q9Y282 383 aa17.23■□□□□ 0.35
TTC28-204ENST00000468807 UBE2QL1A1L167 161 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 NUDT19A8MXV4 375 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 MPIG6BO95866 241 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 IZUMO1Q8IYV9 350 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 NANOGP1Q8N7R0 232 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 NKAIN3Q8N8D7 197 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 C8orf31Q8N9H6 132 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 OR51D1Q8NGF3 324 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 OR1L1Q8NH94 360 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 TFAP2CQ92754 450 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 RCC1LQ96I51 464 aaKnown RBP17.22■□□□□ 0.35
TTC28-204ENST00000468807 PLCXD1Q9NUJ7 323 aa17.22■□□□□ 0.35
TTC28-204ENST00000468807 HBZP02008 142 aa17.21■□□□□ 0.35
TTC28-204ENST00000468807 RCC1P18754 421 aaPredicted RBP17.21■□□□□ 0.35
TTC28-204ENST00000468807 RPL23AP62750 156 aaKnown RBP17.21■□□□□ 0.35
TTC28-204ENST00000468807 GPR50Q13585 617 aa17.21■□□□□ 0.35
TTC28-204ENST00000468807 NKAPLQ5M9Q1 402 aa17.21■□□□□ 0.35
TTC28-204ENST00000468807 TGIF2LXQ8IUE1 241 aa17.21■□□□□ 0.35
TTC28-204ENST00000468807 CDH26Q8IXH8 852 aa17.21■□□□□ 0.35
TTC28-204ENST00000468807 THRSPQ92748 146 aa17.21■□□□□ 0.35
TTC28-204ENST00000468807 LINC01548A6NM66 108 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 IGHG2P01859 326 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 CD1AP06126 327 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 FUT3P21217 361 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 EBI3Q14213 229 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 INSL4Q14641 139 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 TRAT1Q6PIZ9 186 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 C8orf86Q6ZUL3 223 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 OR2W3Q7Z3T1 314 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 STPG2Q8N412 459 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 KLHL30-AS1Q8NEE0 82 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 FBLIM1Q8WUP2 373 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 CYYR1Q96J86 154 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 Q96M66 194 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 UQCC2Q9BRT2 126 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 KCNIP1Q9NZI2 227 aa17.2■□□□□ 0.34
TTC28-204ENST00000468807 FAM90A10PA6NDY2 464 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 FAM90A7PA6NKC0 464 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 FAM90A23PA8MXZ1 464 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 ZNF736B4DX44 427 aaPredicted RBP17.19■□□□□ 0.34
TTC28-204ENST00000468807 ANKRD65E5RJM6 399 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 PTGES3LE9PB15 166 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 MOSP00540 346 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 GPR12P47775 334 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 GABPB1Q06547 395 aaPredicted RBP17.19■□□□□ 0.34
TTC28-204ENST00000468807 TMEM30BQ3MIR4 351 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 Q3ZCU0 254 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 CT45A1Q5HYN5 189 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 SLC25A48Q6ZT89 311 aaKnown RBP17.19■□□□□ 0.34
TTC28-204ENST00000468807 C18orf65Q6ZTR6 163 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 LINC00482Q8N8I6 264 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 CT45A3Q8NHU0 189 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 ST6GALNAC6Q969X2 333 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 RBMXL1Q96E39 390 aaKnown RBP17.19■□□□□ 0.34
TTC28-204ENST00000468807 RASL11BQ9BPW5 248 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 TMED9Q9BVK6 235 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 MND1Q9BWT6 205 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 CST11Q9H112 138 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 TAF9BQ9HBM6 251 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 OR2S2Q9NQN1 319 aa17.19■□□□□ 0.34
TTC28-204ENST00000468807 AP4M1O00189 453 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 CASQ2O14958 399 aaPredicted RBP17.18■□□□□ 0.34
TTC28-204ENST00000468807 TXNL1O43396 289 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 PDCD6O75340 191 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 CA11O75493 328 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 DUS4LO95620 317 aaKnown RBP17.18■□□□□ 0.34
TTC28-204ENST00000468807 CD1BP29016 333 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 ZNF134P52741 427 aa17.18■□□□□ 0.34
TTC28-204ENST00000468807 ACSM3Q53FZ2 586 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms