RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 RFESDQ8TAC1 157 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 GALMQ96C23 342 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 KIRREL1Q96J84 757 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 ABHD1Q96SE0 405 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 ST6GALNAC5Q9BVH7 336 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 HEXA-AS1Q9H8Q6 139 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 IFT46Q9NQC8 304 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 SIRT7Q9NRC8 400 aa12.46□□□□□ -0.41
SNIP1-202ENST00000468040 ZNF230Q9UIE0 474 aaPredicted RBP12.46□□□□□ -0.41
SNIP1-202ENST00000468040 CELSR1Q9NYQ6 3014 aa12.46□□□□□ -0.42
SNIP1-202ENST00000468040 SDCBPO00560 298 aaPredicted RBP12.45□□□□□ -0.42
SNIP1-202ENST00000468040 CTDSPLO15194 276 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 FABP7O15540 132 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 PTBP1P26599 531 aaKnown RBP eCLIP12.45□□□□□ -0.421e-8■■□□□ 14.1
SNIP1-202ENST00000468040 HTD2P86397 168 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 STEAP3Q658P3 488 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 ZNF782Q6ZMW2 699 aaPredicted RBP12.45□□□□□ -0.42
SNIP1-202ENST00000468040 HOGA1Q86XE5 327 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 OR4A4PQ8NGN8 299 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 OR13D1Q8NGV5 346 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 OR1L1Q8NH94 360 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 NANPQ8TBE9 248 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 GPX8Q8TED1 209 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 FCAMRQ8WWV6 532 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 GCDHQ92947 438 aaPredicted RBP12.45□□□□□ -0.42
SNIP1-202ENST00000468040 SOSTQ9BQB4 213 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 TMEM133Q9H2Q1 129 aa12.45□□□□□ -0.42
SNIP1-202ENST00000468040 KIAA2026Q5HYC2 2103 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 A0A087X0M5 115 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 A0A1B0GX30 115 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 MEIOCA2RUB1 952 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 GABARAPH6UMI1 98 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 MMP23AO75900 390 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 DIRAS3O95661 229 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 AVPP01185 164 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 NFYBP25208 207 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 LTC4SQ16873 150 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 FAM120AOSQ5T036 256 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 GPR157Q5UAW9 335 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 C1orf229Q6ZS94 237 aaPredicted RBP12.44□□□□□ -0.42
SNIP1-202ENST00000468040 UBALD1Q8TB05 177 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 IL1F10Q8WWZ1 152 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 MAFIPQ8WZ33 124 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 TNFRSF14Q92956 283 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 LHX4Q969G2 390 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 GSX1Q9H4S2 264 aaPredicted RBP12.44□□□□□ -0.42
SNIP1-202ENST00000468040 OR2S2Q9NQN1 319 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 JPT1Q9UK76 154 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 V9GYH0 126 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 ZNF469Q96JG9 3925 aaPredicted RBP12.44□□□□□ -0.42
SNIP1-202ENST00000468040 WNK2Q9Y3S1 2297 aa12.44□□□□□ -0.42
SNIP1-202ENST00000468040 ACANP16112 2415 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 TRAV40A0A0B4J280 105 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 MEIS3P1A6NDR6 274 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 SCTP09683 121 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 CTXN2P0C2S0 81 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 HOXB4P17483 251 aaPredicted RBP12.43□□□□□ -0.42
SNIP1-202ENST00000468040 ZBTB25P24278 435 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 CD34P28906 385 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 RCVRNP35243 200 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 GDNFP39905 211 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 UBE2E1P51965 193 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 LOXL3P58215 753 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 BPIFB3P59826 476 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 ACTBP60709 375 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 ACTG1P63261 375 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 GVQW1Q8N7I0 195 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 BEST4Q8NFU0 473 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 SMIM4Q8WVI0 70 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 SUCNR1Q9BXA5 334 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 CLEC7AQ9BXN2 247 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 GFOD1Q9NXC2 390 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 ANXA10Q9UJ72 324 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 CSPG4Q6UVK1 2322 aa12.43□□□□□ -0.42
SNIP1-202ENST00000468040 IGHV2-26A0A0B4J1V2 119 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 CENPVL3A0A0U1RRI6 287 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 RNASEK-C17orf49H0YIS7 233 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 RBBP9O75884 186 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 RGS11O94810 467 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 GSTT2P0CG29 244 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 GSTT2BP0CG30 244 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 COX7A1P24310 79 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 DLX1P56177 255 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 ARPC4P59998 168 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 ZNF45Q02386 682 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 SSBP1Q04837 148 aaKnown RBP12.42□□□□□ -0.42
SNIP1-202ENST00000468040 Q3ZCU0 254 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 PYDC2Q56P42 97 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 ABHD12Q8N2K0 398 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 PNKDQ8N490 385 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 OR11H6Q8NGC7 330 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 OR52I2Q8NH67 350 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 CABLES2Q9BTV7 478 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 MTFP1Q9UDX5 166 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 CDC42EP3Q9UKI2 254 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 HIVEP1P15822 2718 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 ZANQ9Y493 2812 aa12.42□□□□□ -0.42
SNIP1-202ENST00000468040 MAST4O15021 2626 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms