RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ZNF355PQ9NSJ1 428 aa7.68□□□□□ -1.18
HDAC3-203ENST00000467533 GFOD1Q9NXC2 390 aa7.68□□□□□ -1.18
HDAC3-203ENST00000467533 PEMTQ9UBM1 199 aa7.68□□□□□ -1.18
HDAC3-203ENST00000467533 DNAH11Q96DT5 4516 aa7.68□□□□□ -1.18
HDAC3-203ENST00000467533 HERC1Q15751 4861 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 DNAH2Q9P225 4427 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 IGKV1-9A0A0C4DH69 117 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 MSGN1A6NI15 193 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 ZNF785A8K8V0 405 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 SPRY2O43597 315 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 MITFO75030 526 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-203ENST00000467533 RPP14O95059 124 aaKnown RBP7.67□□□□□ -1.18
HDAC3-203ENST00000467533 ATF1P18846 271 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 SLC2A5P22732 501 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 VHLP40337 213 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 ZNF137PP52743 207 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 HMGA2P52926 109 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 CXCR4P61073 352 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 CDK5R1Q15078 307 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 RPEL1Q2QD12 228 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 DEFB135Q30KP9 77 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 MOGAT2Q3SYC2 334 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 C8orf82Q6P1X6 216 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-203ENST00000467533 CD200R1LQ6Q8B3 271 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 SLC16A13Q7RTY0 426 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 PPP1R27Q86WC6 154 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 OR52M1Q8NGK5 317 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 ARL11Q969Q4 196 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 RITA1Q96K30 269 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 RDH12Q96NR8 316 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 OPALINQ96PE5 141 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 NR1H4Q96RI1 486 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-203ENST00000467533 DGCR6LQ9BY27 220 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 GORASP2Q9H8Y8 452 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 RHOFQ9HBH0 211 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 ABCD2Q9UBJ2 740 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 FBXL17Q9UF56 701 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 TP53TG1Q9Y2A0 90 aa7.67□□□□□ -1.18
HDAC3-203ENST00000467533 PKD1P98161 4303 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 TRAV24A0A0B4J272 114 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 OR2A4O95047 310 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 NDUFA3O95167 84 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 IFNA4P05014 189 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 MECP2P51608 486 aaKnown RBP7.66□□□□□ -1.18
HDAC3-203ENST00000467533 CX3CL1P78423 397 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 CCDC54Q8NEL0 328 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 LFNGQ8NES3 379 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 CNIH3Q8TBE1 160 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 C10orf35Q96D05 121 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 CNN2Q99439 309 aaKnown RBP7.66□□□□□ -1.18
HDAC3-203ENST00000467533 NIPSNAP1Q9BPW8 284 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 FBXL15Q9H469 300 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 MAGEL2Q9UJ55 1249 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 NUBP2Q9Y5Y2 271 aa7.66□□□□□ -1.18
HDAC3-203ENST00000467533 A0A0G2JLM5 398 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 LOC107986453A0A1B0GWG9 222 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 LANCL1O43813 399 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 EGR2P11161 476 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-203ENST00000467533 COX4I1P13073 169 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 ZNF20P17024 532 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 GZMHP20718 246 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 KCNJ3P48549 501 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 ALDH3A2P51648 485 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 TCTAP57738 103 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 GINS1Q14691 196 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 RBMS2Q15434 407 aaKnown RBP7.65□□□□□ -1.18
HDAC3-203ENST00000467533 Q3ZCU0 254 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 AKIRIN2Q53H80 203 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 GVQW1Q8N7I0 195 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 NPBQ8NG41 125 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 OR10V1Q8NGI7 309 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 C2CD4CQ8TF44 421 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 TSEN15Q8WW01 171 aaKnown RBP7.65□□□□□ -1.18
HDAC3-203ENST00000467533 SPSB1Q96BD6 273 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 ADAT3Q96EY9 351 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-203ENST00000467533 WDR89Q96FK6 387 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-203ENST00000467533 NSMCE2Q96MF7 247 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 MRPL20Q9BYC9 149 aaKnown RBP7.65□□□□□ -1.18
HDAC3-203ENST00000467533 GNG12Q9UBI6 72 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 PEF1Q9UBV8 284 aaKnown RBP7.65□□□□□ -1.18
HDAC3-203ENST00000467533 GAB2Q9UQC2 676 aa7.65□□□□□ -1.18
HDAC3-203ENST00000467533 HSPG2P98160 4391 aa7.65□□□□□ -1.19
HDAC3-203ENST00000467533 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 TMEM30CPA0ZSE6 113 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 CCDC182A6NF36 153 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 ZNF670-ZNF695F2Z2N8 137 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 C15orf65H3BRN8 121 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 RTL8CO15255 209 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 AIREO43918 545 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 TRBV12-3P01733 135 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 HMGN1P05114 100 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 TMEM225BP0DP42 221 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 APOC4P55056 127 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 NANOS2P60321 138 aaKnown RBP7.64□□□□□ -1.19
HDAC3-203ENST00000467533 PSME3P61289 254 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 DEFA5Q01523 94 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 PAX5Q02548 391 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 TRIM25Q14258 630 aaKnown RBP7.64□□□□□ -1.19
HDAC3-203ENST00000467533 MICAQ29983 383 aa7.64□□□□□ -1.19
HDAC3-203ENST00000467533 Q6ZWC4 215 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms