RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SULT1A2P50226 295 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 RAB9AP51151 201 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 GFRA1P56159 465 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 POLR2GP62487 172 aaKnown RBP eCLIP7.62□□□□□ -1.19
HPS4-209ENST00000466781 HLA-DRB5Q30154 266 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 OR5A2Q8NGI9 324 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 RPS4Y2Q8TD47 263 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 EAF1Q96JC9 268 aaPredicted RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 DUX5Q96PT3 197 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 OPN3Q9H1Y3 402 aaPredicted RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 MED19A0JLT2 244 aaPredicted RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 MPV17LQ2QL34 196 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 GAB4Q2WGN9 574 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 GAPTQ8N292 157 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 ZNF680Q8NEM1 530 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 DDB2Q92466 427 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 FAM60AQ9NP50 221 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 SLC6A13Q9NSD5 602 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 TMEM38BQ9NVV0 291 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 WIPI2Q9Y4P8 454 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 ZNF236Q9UL36 1845 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 GREB1LQ9C091 1923 aaPredicted RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 CORTO00230 105 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 ZFPL1O95159 310 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 WNT5AP41221 380 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 ZIC1Q15915 447 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 LRRC75BQ2VPJ9 315 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 MRM1Q6IN84 353 aaKnown RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 TEX261Q6UWH6 196 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 ZBTB34Q8NCN2 500 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 OR10G8Q8NGN5 311 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 ADAMTS17Q8TE56 1095 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 DCTN5Q9BTE1 182 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 PSME4Q14997 1843 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 SCN1AP35498 2009 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 M0R143 59 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 GAPDHP04406 335 aaKnown RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 ZP3P21754 424 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 RPL31P62899 125 aaKnown RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 SSX1Q16384 188 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 FAM53AQ6NSI3 398 aaPredicted RBP7.62□□□□□ -1.19
HPS4-209ENST00000466781 PET117Q6UWS5 81 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 OR8A1Q8NGG7 326 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 HMGCLL1Q8TB92 370 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 LPAR5Q9H1C0 372 aa7.62□□□□□ -1.19
HPS4-209ENST00000466781 OR4C46A6NHA9 309 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 K7N7A8 449 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 CXorf1O96002 111 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 HIST1H1BP16401 226 aaKnown RBP7.61□□□□□ -1.19
HPS4-209ENST00000466781 CEBPDP49716 269 aaPredicted RBP7.61□□□□□ -1.19
HPS4-209ENST00000466781 RPS4XP62701 263 aaKnown RBP7.61□□□□□ -1.19
HPS4-209ENST00000466781 AESQ08117 197 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 HERPUD1Q15011 391 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 WDR25Q64LD2 544 aaPredicted RBP7.61□□□□□ -1.19
HPS4-209ENST00000466781 CALHM1Q8IU99 346 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 WDR34Q96EX3 536 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 SLC25A33Q9BSK2 321 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 OR2J1Q9GZK6 312 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 UTRNP46939 3433 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 ISLRO14498 428 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 SMAD7O15105 426 aaKnown RBP7.61□□□□□ -1.19
HPS4-209ENST00000466781 CD160O95971 181 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 MESP2Q0VG99 397 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 COX19Q49B96 90 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 MESTQ5EB52 335 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 TMEM78Q5T7P6 136 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 CBLN3Q6UW01 205 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 GVQW1Q8N7I0 195 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 ATG101Q9BSB4 218 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 BET1LQ9NYM9 111 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 IGKV3D-15A0A087WSY6 115 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 TMSB15BA0A087X1C1 80 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 DHRS7CA6NNS2 312 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 PDE6DO43924 150 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 IGKV3-15P01624 115 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 TTRP02766 147 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 FAM157CP0CG43 387 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 ZNF137PP52743 207 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 FOXL2P58012 376 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 SLC22A18ASQ8N1D0 253 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 PTX4Q96A99 478 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 MRAP2Q96G30 205 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 RBFOX3A6NFN3 312 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 ZNF735P0CB33 412 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 HIST3H3Q16695 136 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 RAB37Q96AX2 223 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 ANGPTL4Q9BY76 406 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 RPL36A-HNRNPH2H7BZ11 118 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 IFNL4K9M1U5 179 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 RAB29O14966 203 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 MPC2O95563 127 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 APCSP02743 223 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 SPNP16150 400 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 PDLIM4P50479 330 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 TEPPQ6URK8 271 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 VN1R4Q7Z5H5 301 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 CLRN3Q8NCR9 226 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 OR52M1Q8NGK5 317 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
HPS4-209ENST00000466781 C12orf57Q99622 126 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms