RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 GAPDHP04406 335 aaKnown RBP15.68■□□□□ 0.1
CAPN3-209ENST00000466222 RBM39Q14498 530 aaKnown RBP15.68■□□□□ 0.1
CAPN3-209ENST00000466222 ZNF672Q499Z4 452 aaPredicted RBP15.68■□□□□ 0.1
CAPN3-209ENST00000466222 BRICD5Q6PL45 260 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 MAFIPQ8WZ33 124 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 SMIM8Q96KF7 97 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 NECAP2Q9NVZ3 263 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 TREM2Q9NZC2 230 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 IL36GQ9NZH8 169 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.67■□□□□ 0.1
CAPN3-209ENST00000466222 GEMIN2O14893 280 aaKnown RBP15.67■□□□□ 0.1
CAPN3-209ENST00000466222 KCNAB3O43448 404 aa15.67■□□□□ 0.1
CAPN3-209ENST00000466222 KNG1P01042 644 aa15.67■□□□□ 0.1
CAPN3-209ENST00000466222 HOXB5P09067 269 aa15.67■□□□□ 0.1
CAPN3-209ENST00000466222 TGIF2LYQ8IUE0 185 aa15.67■□□□□ 0.1
CAPN3-209ENST00000466222 PLCE1Q9P212 2302 aa15.67■□□□□ 0.1
CAPN3-209ENST00000466222 A6NLC8 198 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 J3QT63 122 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 WNT9BO14905 357 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 NUPL2O15504 423 aaKnown RBP15.66■□□□□ 0.1
CAPN3-209ENST00000466222 H2AFB1P0C5Y9 115 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 APOBEC3AP31941 199 aaPredicted RBP15.66■□□□□ 0.1
CAPN3-209ENST00000466222 S100A10P60903 97 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 BLOC1S1P78537 153 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 CCL8P80075 99 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 IL24Q13007 206 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 IAH1Q2TAA2 248 aaPredicted RBP15.66■□□□□ 0.1
CAPN3-209ENST00000466222 DHRS11Q6UWP2 260 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 OSR2Q8N2R0 312 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 ITLN1Q8WWA0 313 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 ZFP57Q9NU63 452 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 PRR13Q9NZ81 148 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 GSKIPQ9P0R6 139 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 ST3GAL6Q9Y274 331 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 KCNIP3Q9Y2W7 256 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 HEATR1Q9H583 2144 aaKnown RBP15.66■□□□□ 0.1
CAPN3-209ENST00000466222 ZNF705EA8MWA4 302 aaPredicted RBP15.66■□□□□ 0.1
CAPN3-209ENST00000466222 TRAPPC2LH3BP13 241 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 HKR1P10072 659 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 PMELP40967 661 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 FLI1Q01543 452 aaPredicted RBP15.66■□□□□ 0.1
CAPN3-209ENST00000466222 CRYBG3Q68DQ2 2970 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 MEX3BQ6ZN04 569 aaKnown RBP15.66■□□□□ 0.1
CAPN3-209ENST00000466222 TMEM200AQ86VY9 491 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 MKXQ8IYA7 352 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 SPAG16Q8N0X2 631 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 MEGF10Q96KG7 1140 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 CMSS1Q9BQ75 279 aaKnown RBP15.66■□□□□ 0.1
CAPN3-209ENST00000466222 SEC11CQ9BY50 192 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 PLEKHA2Q9HB19 425 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 LRRK2Q5S007 2527 aa15.66■□□□□ 0.1
CAPN3-209ENST00000466222 IGKV1D-8A0A087WSZ0 117 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 FAM74A7A6NL05 159 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 SNAPINO95295 136 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 OR5H8P0DN80 308 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 CHATP28329 748 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 FAM74A3Q4VXF1 159 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 WDR82Q6UXN9 313 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 GALNT14Q96FL9 552 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 PKIBQ9C010 78 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 TAF9BQ9HBM6 251 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 AK3Q9UIJ7 227 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 POMT1Q9Y6A1 747 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 TACC2O95359 2948 aa15.65■□□□□ 0.1
CAPN3-209ENST00000466222 TMEM210A6NLX4 147 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 F8W036 122 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 K7EPK0 472 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 DEDDO75618 318 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 JTBO76095 146 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 PRKACAP17612 351 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 SULT1A2P50226 295 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 MOGAT3Q86VF5 341 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 SAXO1Q8IYX7 474 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 FAM71E2Q8N5Q1 922 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 SUCNR1Q9BXA5 334 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 ICE1Q9Y2F5 2266 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 A1L4Q6 167 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 C17orf100A8MU93 164 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 PRSS44E7EML9 344 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 TFF1P04155 84 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 FCGR3AP08637 254 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 ZNF728P0DKX0 622 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 RPL12P30050 165 aaKnown RBP15.64■□□□□ 0.09
CAPN3-209ENST00000466222 CD200P41217 278 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 TNFAIP6P98066 277 aaPredicted RBP15.64■□□□□ 0.09
CAPN3-209ENST00000466222 PUSL1Q8N0Z8 303 aaKnown RBP15.64■□□□□ 0.09
CAPN3-209ENST00000466222 MUC15Q8N387 334 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 LRTM2Q8N967 370 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 Q8NFD4 153 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 OR4A4PQ8NGN8 299 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 FAM222BQ8WU58 562 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 TLNRD1Q9H1K6 362 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 OR2S2Q9NQN1 319 aa15.64■□□□□ 0.09
CAPN3-209ENST00000466222 PGA5P0DJD9 388 aa15.63■□□□□ 0.09
CAPN3-209ENST00000466222 ADCYAP1P18509 176 aa15.63■□□□□ 0.09
CAPN3-209ENST00000466222 CAV2P51636 162 aa15.63■□□□□ 0.09
CAPN3-209ENST00000466222 UCP3P55916 312 aa15.63■□□□□ 0.09
CAPN3-209ENST00000466222 RBM11P57052 281 aaKnown RBP15.63■□□□□ 0.09
CAPN3-209ENST00000466222 FGF12P61328 243 aa15.63■□□□□ 0.09
CAPN3-209ENST00000466222 ERVK11-1P61568 191 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms