RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 GAPTQ8N292 157 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 OR52L2PQ8NGH6 319 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 OR10V1Q8NGI7 309 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 LGALS14Q8TCE9 139 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 SSMEM1Q8WWF3 244 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 MRPS26Q9BYN8 205 aaKnown RBP9.43□□□□□ -0.9
CUX1-207ENST00000465461 MEGF9Q9H1U4 602 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 LINC00574Q9H8X3 128 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 TAF9BQ9HBM6 251 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 CHMP1AQ9HD42 196 aaPredicted RBP9.43□□□□□ -0.9
CUX1-207ENST00000465461 ELF5Q9UKW6 265 aaPredicted RBP9.43□□□□□ -0.9
CUX1-207ENST00000465461 PSG11Q9UQ72 335 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 KCNK7Q9Y2U2 307 aa9.43□□□□□ -0.9
CUX1-207ENST00000465461 TBL2Q9Y4P3 447 aaKnown RBP9.43□□□□□ -0.9
CUX1-207ENST00000465461 CLDN34H7C241 214 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 J3QR06 171 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 RAB27BO00194 218 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 SLC31A2O15432 143 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 ORC5O43913 435 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 IGLV1-47P01700 117 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 TFAP2AP05549 437 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 GNB3P16520 340 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 RAB6AP20340 208 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 CD24P25063 80 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 HTR1DP28221 377 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 CD34P28906 385 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 LOXL3P58215 753 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 GNMTQ14749 295 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 HLA-DRB5Q30154 266 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 TIMM50Q3ZCQ8 353 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 GPR107Q5VW38 600 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 GDPGP1Q6ZNW5 385 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 OR56B1Q8NGI3 324 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 OR10R2Q8NGX6 335 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 PIFOQ8TCI5 191 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 ZFAND2BQ8WV99 257 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 GCDHQ92947 438 aaPredicted RBP9.42□□□□□ -0.9
CUX1-207ENST00000465461 MALSU1Q96EH3 234 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 DPAGT1Q9H3H5 408 aa9.42□□□□□ -0.9
CUX1-207ENST00000465461 MBNL3Q9NUK0 354 aaKnown RBP9.42□□□□□ -0.9
CUX1-207ENST00000465461 BUB1B-PAK6H3BSN5 160 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 H3BUI4 141 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 F2RL2O00254 374 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 GPR137BO60478 399 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 CA11O75493 328 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 NAPSAO96009 420 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 ALDH3B2P48448 385 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 SERPINB10P48595 397 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 PRRX1P54821 245 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 RELBQ01201 579 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 LRRC75BQ2VPJ9 315 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 FBLN7Q53RD9 439 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 C6orf183Q5T699 404 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 SLC16A12Q6ZSM3 486 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 TMEM86BQ8N661 226 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 DTX3Q8N9I9 347 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 OR9G1Q8NH87 305 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 ZNF596Q8TC21 504 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 RAB3CQ96E17 227 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 RBMXL1Q96E39 390 aaKnown RBP9.41□□□□□ -0.9
CUX1-207ENST00000465461 CMSS1Q9BQ75 279 aaKnown RBP9.41□□□□□ -0.9
CUX1-207ENST00000465461 MMP28Q9H239 520 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 GFOD1Q9NXC2 390 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 KCNIP1Q9NZI2 227 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 DPM3Q9P2X0 92 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 HSF4Q9ULV5 492 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 POMT1Q9Y6A1 747 aa9.41□□□□□ -0.9
CUX1-207ENST00000465461 ATRQ13535 2644 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 BTBD17A6NE02 478 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 LY6LH3BQJ8 138 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 SPINT2O43291 252 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 CRYBA1P05813 215 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 SCTP09683 121 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 ZNF134P52741 427 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 TPTE2P1Q5T6R2 138 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 MINOS1Q5TGZ0 78 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 ZNF880Q6PDB4 577 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 CCBE1Q6UXH8 406 aaPredicted RBP9.4□□□□□ -0.9
CUX1-207ENST00000465461 TMEM219Q86XT9 240 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 IZUMO1Q8IYV9 350 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 OR10A7Q8NGE5 316 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 IL1F10Q8WWZ1 152 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 MAFIPQ8WZ33 124 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 OR2S2Q9NQN1 319 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 C1RLQ9NZP8 487 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 GNG12Q9UBI6 72 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 ZNF230Q9UIE0 474 aaPredicted RBP9.4□□□□□ -0.9
CUX1-207ENST00000465461 VPREB3Q9UKI3 123 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 MINOS1-NBL1R4GNA1 71 aa9.4□□□□□ -0.9
CUX1-207ENST00000465461 METTL21EPA6NDL7 271 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 LEUTXA8MZ59 168 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 MFNGO00587 321 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 CHST1O43916 411 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 HKR1P10072 659 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 HIST1H1DP16402 221 aaKnown RBP9.39□□□□□ -0.91
CUX1-207ENST00000465461 PPP1CCP36873 323 aaKnown RBP9.39□□□□□ -0.91
CUX1-207ENST00000465461 RANBP1P43487 201 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 REG1BP48304 166 aa9.39□□□□□ -0.91
CUX1-207ENST00000465461 HMGN3Q15651 99 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms