RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SOX6P35712 828 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 PITPNAQ00169 270 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 PRB3Q04118 309 aaPredicted RBP13.79□□□□□ -0.2
USP39-211ENST00000465282 DEFB112Q30KQ8 113 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 UBE2NLQ5JXB2 153 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 PRIMA1Q86XR5 153 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 SIGLECL1Q8N7X8 197 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 ZDHHC16Q969W1 377 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 SLC25A38Q96DW6 304 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 MALSU1Q96EH3 234 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 S100A16Q96FQ6 103 aaKnown RBP13.79□□□□□ -0.2
USP39-211ENST00000465282 ZMAT3Q9HA38 289 aaKnown RBP13.79□□□□□ -0.2
USP39-211ENST00000465282 TAF9BQ9HBM6 251 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 KCNK7Q9Y2U2 307 aa13.79□□□□□ -0.2
USP39-211ENST00000465282 A0A0U1RQK1 487 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 TOR1AO14656 332 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 IGLV1-47P01700 117 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 GNB3P16520 340 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 NFYBP25208 207 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 HTD2P86397 168 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 AANATQ16613 207 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 SRSF7Q16629 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP39-211ENST00000465282 PNLIPRP3Q17RR3 467 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 CDNFQ49AH0 187 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 MZT2AQ6P582 158 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 Q6YL49 198 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 LDLRAD3Q86YD5 345 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 TMEM86BQ8N661 226 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 C8orf31Q8N9H6 132 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 OR9G1Q8NH87 305 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 RFESDQ8TAC1 157 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 NDNFQ8TB73 568 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 GALMQ96C23 342 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 ISOC1Q96CN7 298 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 ZNF48Q96MX3 618 aaPredicted RBP13.78□□□□□ -0.2
USP39-211ENST00000465282 MEGF9Q9H1U4 602 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 GFOD1Q9NXC2 390 aa13.78□□□□□ -0.2
USP39-211ENST00000465282 A0A1W2PRD5 423 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 A0A1W2PRF3 423 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 A0A1W2PRM7 423 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 CLDN34H7C241 214 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 SDCBPO00560 298 aaPredicted RBP13.77□□□□□ -0.21
USP39-211ENST00000465282 HBZP02008 142 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 HTR1DP28221 377 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 TALDO1P37837 337 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 GDNFP39905 211 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 LOXL3P58215 753 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 ARFRP1Q13795 201 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 HMGN3Q15651 99 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 KRTAP21-3Q3LHN1 58 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 HACD4Q5VWC8 232 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 STEAP3Q658P3 488 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 SAMD12Q8N8I0 201 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 ZFAND2BQ8WV99 257 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 ZNF286AQ9HBT8 521 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 Q9N2K0 584 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 POMT1Q9Y6A1 747 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 CEPT1Q9Y6K0 416 aa13.77□□□□□ -0.21
USP39-211ENST00000465282 ZNF701M0R085 212 aaPredicted RBP13.76□□□□□ -0.21
USP39-211ENST00000465282 XRCC3O43542 346 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 APOA1P02647 267 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 CEACAM3P40198 252 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 BAMBIQ13145 260 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 ZNF260Q3ZCT1 412 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 LY6G6FQ5SQ64 297 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 OLFML2AQ68BL7 652 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 SSMEM1Q8WWF3 244 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 DPAGT1Q9H3H5 408 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 DPM3Q9P2X0 92 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 JPT1Q9UK76 154 aa13.76□□□□□ -0.21
USP39-211ENST00000465282 AMMECR1Q9Y4X0 333 aaPredicted RBP13.76□□□□□ -0.21
USP39-211ENST00000465282 SOX21Q9Y651 276 aaPredicted RBP13.76□□□□□ -0.21
USP39-211ENST00000465282 A0A075B6Q4 140 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 LEUTXA8MZ59 168 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 H3BMQ9 156 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 TRIM77I1YAP6 450 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 J3QR06 171 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 RGS11O94810 467 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 DIRAS3O95661 229 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 MELTFP08582 738 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 DTYMKP23919 212 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 KIR2DS4P43632 304 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 KIR2DS1Q14954 304 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 SPCS2Q15005 226 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 HLA-DRB5Q30154 266 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 BAIAP2L2Q6UXY1 529 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 Q6ZS49 121 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 PRR18Q8N4B5 295 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 LINC00311Q8N616 119 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 OR4P4Q8NGL7 312 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 OR1L1Q8NH94 360 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 SETD6Q8TBK2 473 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 AJUBAQ96IF1 538 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 CYYR1Q96J86 154 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 HDHD3Q9BSH5 251 aaPredicted RBP13.75□□□□□ -0.21
USP39-211ENST00000465282 MMP28Q9H239 520 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 OR2S2Q9NQN1 319 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 ZNRD1Q9P1U0 126 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 COMMD3Q9UBI1 195 aa13.75□□□□□ -0.21
USP39-211ENST00000465282 GNG12Q9UBI6 72 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms