RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RPL12P30050 165 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 GNRHRP30968 328 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 SULT1A2P50226 295 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 MSMPQ1L6U9 139 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 SP6Q3SY56 376 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 GGNBP1Q5YKI7 109 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 OR14J1Q9UGF5 321 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 MGAQ8IWI9 3026 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 GPR31O00270 319 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 TSPAN9O75954 239 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 SNAPINO95295 136 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 CD200P41217 278 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 CAV2P51636 162 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 RPS23P62266 143 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 LGI3Q8N145 548 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 SECTM1Q8WVN6 248 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 MRPL24Q96A35 216 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 NDRG3Q9UGV2 375 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 DUSP13Q9UII6 198 aa18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 SPENQ96T58 3664 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-216ENST00000464275 WNT9BO14905 357 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 MPPED1O15442 326 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 FAM87AP0C7U9 286 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 KLF3P57682 345 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 FLI1Q01543 452 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 RBPJQ06330 500 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 MST1LQ2TV78 715 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 TMEM268Q5VZI3 342 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 LRP11Q86VZ4 500 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 LDLRAD3Q86YD5 345 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 OR2Z1Q8NG97 314 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 OR10J5Q8NHC4 309 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 PRR7Q8TB68 274 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 GLYATL2Q8WU03 294 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 PARP11Q9NR21 331 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 UFSP2Q9NUQ7 469 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 TAAR3PQ9P1P4 343 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 FBXO9Q9UK97 447 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 TRAPPC2LQ9UL33 140 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 WIPI2Q9Y4P8 454 aa18.33■□□□□ 0.52
PDLIM2-216ENST00000464275 E5RGE8 158 aa18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 NPIPB11E5RHQ5 1161 aa18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 ATP6V1G2-DDX39BF2Z307 99 aa18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 F8W036 122 aa18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 NUPL2O15504 423 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 H1FOOQ8IZA3 346 aaPredicted RBP18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 MSI2Q96DH6 328 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 C18orf12Q96KH6 178 aa18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 OR2S2Q9NQN1 319 aa18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 NSG2Q9Y328 171 aa18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 KIAA2026Q5HYC2 2103 aa18.32■□□□□ 0.52
PDLIM2-216ENST00000464275 C3orf85A0A1B0GTC6 90 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 PHF1O43189 567 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 PRR30Q53SZ7 412 aaPredicted RBP18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 PUSL1Q8N0Z8 303 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 MBNL3Q9NUK0 354 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 UQCC1Q9NVA1 299 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 PTPRQQ9UMZ3 2332 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 IGKV1D-13A0A0B4J2D9 117 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 FAM74A7A6NL05 159 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 PTBP3O95758 552 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 IGKV1-13P0DP09 117 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 SRPXP78539 464 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 SMIM21Q3B7S5 101 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 FAM74A3Q4VXF1 159 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 RPL7L1Q6DKI1 246 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 ZNF818PQ6ZRF7 136 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 UBAC2Q8NBM4 344 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 KIRREL1Q96J84 757 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 JKAMPQ9P055 326 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 RAXQ9Y2V3 346 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 OR2W1Q9Y3N9 320 aa18.31■□□□□ 0.52
PDLIM2-216ENST00000464275 IGLV3-9A0A075B6K5 115 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 C16orf97H3BN30 126 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 ADCYAP1P18509 176 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 CCKARP32238 428 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 CEBPDP49716 269 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 F2RL1P55085 397 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 GPR157Q5UAW9 335 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 TBC1D26Q86UD7 250 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 OR10Z1Q8NGY1 313 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 TMEM171Q8WVE6 324 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 TREM1Q9NP99 234 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 SH3BGRL2Q9UJC5 107 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 IFNL4K9M1U5 179 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 CD40P25942 277 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 HMGN3Q15651 99 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 DHRS7BQ6IAN0 325 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 LRRC29Q8WV35 223 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 TP53RKQ96S44 253 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 CCL28Q9NRJ3 127 aa18.3■□□□□ 0.52
PDLIM2-216ENST00000464275 CADP27708 2225 aa18.29■□□□□ 0.52
PDLIM2-216ENST00000464275 TMEM30CPA0ZSE6 113 aa18.29■□□□□ 0.52
PDLIM2-216ENST00000464275 PSPNO60542 156 aa18.29■□□□□ 0.52
PDLIM2-216ENST00000464275 SLC35E4Q6ICL7 350 aa18.29■□□□□ 0.52
PDLIM2-216ENST00000464275 VHLLQ6RSH7 139 aa18.29■□□□□ 0.52
PDLIM2-216ENST00000464275 C22orf34Q6ZV56 151 aa18.29■□□□□ 0.52
PDLIM2-216ENST00000464275 COMMD1Q8N668 190 aa18.29■□□□□ 0.52
PDLIM2-216ENST00000464275 BOLLQ8N9W6 283 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-216ENST00000464275 FBXL17Q9UF56 701 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms