RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ATP23Q9Y6H3 246 aa12.24□□□□□ -0.45
COL5A1-205ENST00000464187 TRBV6-6A0A0A6YYG2 114 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 KIR2DS1A0A191URI9 304 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 LRP5LA4QPB2 252 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 ZSCAN5BA6NJL1 495 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 HS3ST1O14792 307 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 TUSC2O75896 110 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 C1QL1O75973 258 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 DIRAS3O95661 229 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 SCGB1D2O95969 90 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 MBPP02686 304 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-205ENST00000464187 TK1P04183 234 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 GNRHRP30968 328 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 KIR2DS4P43632 304 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 SELENOVP59797 346 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 SMCO1Q147U7 214 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 KIR2DS1Q14954 304 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 LDLRAD3Q86YD5 345 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 LGI3Q8N145 548 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 SUN5Q8TC36 379 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 GTF3AQ92664 365 aaKnown RBP12.23□□□□□ -0.45
COL5A1-205ENST00000464187 RDH5Q92781 318 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 DNTTIP1Q9H147 329 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 IGKV1D-13A0A0B4J2D9 117 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-205ENST00000464187 IGHV3-64DA0A0J9YX35 117 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 MPPED1O15442 326 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 IGKV1-13P0DP09 117 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 RPL12P30050 165 aaKnown RBP12.23□□□□□ -0.45
COL5A1-205ENST00000464187 RND3P61587 244 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 ZNF154Q13106 437 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 TUSC1Q2TAM9 212 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 Q6P435 159 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 ZNF880Q6PDB4 577 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 FAM185AQ8N0U4 392 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 SCCPDHQ8NBX0 429 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 SECTM1Q8WVN6 248 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 TMED6Q8WW62 240 aa12.23□□□□□ -0.45
COL5A1-205ENST00000464187 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-205ENST00000464187 FBXO9Q9UK97 447 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-205ENST00000464187 C3orf85A0A1B0GTC6 90 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 A0A1B0GWJ7 208 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 K7EPK0 472 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 GLAP06280 429 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 MEX3BQ6ZN04 569 aaKnown RBP12.22□□□□□ -0.45
COL5A1-205ENST00000464187 ZNF818PQ6ZRF7 136 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 DMRTC2Q8IXT2 367 aaPredicted RBP12.22□□□□□ -0.45
COL5A1-205ENST00000464187 STPG2Q8N412 459 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 FAM71E2Q8N5Q1 922 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 OR1S2Q8NGQ3 325 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 RHOFQ9HBH0 211 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 TAAR3PQ9P1P4 343 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 PCDHB10Q9UN67 800 aa12.22□□□□□ -0.45
COL5A1-205ENST00000464187 ANKHD1Q8IWZ3 2542 aaKnown RBP12.22□□□□□ -0.45
COL5A1-205ENST00000464187 PLCE1Q9P212 2302 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 TMEM210A6NLX4 147 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 CDIPTO14735 213 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 GRPP07492 148 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 CD3EP07766 207 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 CTXN2P0C2S0 81 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 OR4A8P0C604 315 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 ERVK11-1P61568 191 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 HLA-DRB3P79483 266 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 ADIPOQQ15848 244 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 RPL7L1Q6DKI1 246 aaKnown RBP12.21□□□□□ -0.45
COL5A1-205ENST00000464187 TBC1D26Q86UD7 250 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 SLC35G3Q8N808 338 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 ZNF565Q8N9K5 539 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 SPERTQ8NA61 448 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 OR2Z1Q8NG97 314 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 CXXC4Q9H2H0 198 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 ZC4H2Q9NQZ6 224 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 TAS2R3Q9NYW6 316 aa12.21□□□□□ -0.45
COL5A1-205ENST00000464187 GPR31O00270 319 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 TAAR5O14804 337 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 DEGS1O15121 323 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 SIAH2O43255 324 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 ZNF44P15621 663 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 RCC1P18754 421 aaPredicted RBP12.21□□□□□ -0.46
COL5A1-205ENST00000464187 M6PRP20645 277 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 SPIN3Q5JUX0 258 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 GAPTQ8N292 157 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 TMEM222Q9H0R3 208 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 FBXL17Q9UF56 701 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 TMED3Q9Y3Q3 217 aa12.21□□□□□ -0.46
COL5A1-205ENST00000464187 SPTBN1Q01082 2364 aaKnown RBP12.2□□□□□ -0.46
COL5A1-205ENST00000464187 E5RGE8 158 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 FAM157CP0CG43 387 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 PGA5P0DJD9 388 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 SRPXP78539 464 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 TMEM268Q5VZI3 342 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 Q8IYB0 196 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 OR4A4PQ8NGN8 299 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 RNF141Q8WVD5 230 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 NEUROG1Q92886 237 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 GPHA2Q96T91 129 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 NRIP2Q9BQI9 281 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms