RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 SPINT2O43291 252 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 TXNL1O43396 289 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 GLAP06280 429 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 CD1BP29016 333 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 THBS3P49746 956 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 ZNF137PP52743 207 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 EGFEM1PQ0D2K5 195 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 C6orf183Q5T699 404 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 STEAP3Q658P3 488 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 TRAT1Q6PIZ9 186 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 GLIPR1L1Q6UWM5 242 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 ETV3LQ6ZN32 361 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 OR2W3Q7Z3T1 314 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 MRPL41Q8IXM3 137 aaKnown RBP11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 STPG2Q8N412 459 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 JAGN1Q8N5M9 183 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 TMEM104Q8NE00 496 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 OR8H1Q8NGG4 311 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 RTN4IP1Q8WWV3 396 aaPredicted RBP11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 THRSPQ92748 146 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 MUL1Q969V5 352 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 OR14A2Q96R54 314 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 GON7Q9BXV9 100 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 LIN7CQ9NUP9 197 aaKnown RBP11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 C12orf77C9JDV5 145 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 AP4M1O00189 453 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 SC5DO75845 299 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 MPIG6BO95866 241 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 MYCNOSP40205 109 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 REG1BP48304 166 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 DOC2BQ14184 412 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 LRRC36Q1X8D7 754 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 SYT6Q5T7P8 510 aaPredicted RBP11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 SLC25A48Q6ZT89 311 aaKnown RBP11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 ZNF554Q86TJ5 538 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 LYPD6Q86Y78 171 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 ZFP41Q8N8Y5 198 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 ZNF439Q8NDP4 499 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 DERL3Q96Q80 235 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 MCRIP2Q9BUT9 160 aaKnown RBP11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 ABCG5Q9H222 651 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 PLSCR3Q9NRY6 295 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 PLCXD1Q9NUJ7 323 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 ETAA1Q9NY74 926 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 TRAPPC2LQ9UL33 140 aa11.33□□□□□ -0.6
SNRNP40-203ENST00000463988 IGHV3-72A0A0B4J1Y9 119 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 NCBP2LA6PVI3 153 aaKnown RBP11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 K7EIL1 84 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 MOSP00540 346 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 FUT3P21217 361 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 CAPGP40121 348 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 GPR12P47775 334 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 KRTAP10-11P60412 298 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 AWAT2Q6E213 333 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 RAB12Q6IQ22 244 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 TEX38Q6PEX7 206 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 NKAIN3Q8N8D7 197 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 Q8N9W7 124 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 UBALD1Q8TB05 177 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 FBLIM1Q8WUP2 373 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 DPF1Q92782 380 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 UQCC2Q9BRT2 126 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 GHRLQ9UBU3 117 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 PSORS1C1Q9UIG5 152 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 PEX16Q9Y5Y5 336 aa11.32□□□□□ -0.6
SNRNP40-203ENST00000463988 IGHV3-43A0A0B4J1X8 118 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 A0A1W2PPK0 400 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 MAS1P04201 325 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 IGHV3-43DP0DP04 118 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 MGMTP16455 207 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 CELP19835 753 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 MAPK3P27361 379 aaPredicted RBP11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 ZNF134P52741 427 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 WNT4P56705 351 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 PNLIPRP3Q17RR3 467 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 CT45A1Q5HYN5 189 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 LAIR2Q6ISS4 152 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 C8orf59Q8N0T1 100 aaPredicted RBP11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 RNF152Q8N8N0 203 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 CT45A3Q8NHU0 189 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 Q96M66 194 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 S1PR3Q99500 378 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 P2RX4Q99571 388 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 SELENOIQ9C0D9 397 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 MBNL3Q9NUK0 354 aaKnown RBP11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 ZMAT5Q9UDW3 170 aaKnown RBP11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 LINC00527Q9UJ94 153 aa11.31□□□□□ -0.6
SNRNP40-203ENST00000463988 LINC01548A6NM66 108 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 NUDT19A8MXV4 375 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 MYL12BO14950 172 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 SLC31A2O15432 143 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 LANCL1O43813 399 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 CRTAPO75718 401 aaPredicted RBP11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 HBZP02008 142 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 VHLP40337 213 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 GP2P55259 537 aaKnown RBP11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 FOXE3Q13461 319 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 FAM53AQ6NSI3 398 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms