RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	POMT1	Q9Y6A1	747 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	MBD3L3	A6NE82	208 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF729	A6NN14	1252 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	NEU4	Q8WWR8	484 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	NABP1	Q96AH0	204 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	SAT2	Q96F10	170 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	C14orf79	Q96F83	325 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	RNF2	Q99496	336 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	SYNGR2	O43760	224 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	LMX1B	O60663	402 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	C19orf57	Q0VDD7	668 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	PHYHD1	Q5SRE7	291 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	TMED6	Q8WW62	240 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	PLSCR2	Q9NRY7	297 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	PDGFA	P04085	211 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	PRSS12	P56730	875 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	SFT2D1	Q8WV19	159 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	RNF138	Q8WVD3	245 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	R3HDM4	Q96D70	268 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	CCL28	Q9NRJ3	127 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-223	ENST00000463004		A0A1B0GV50	99 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	PQLC2L	A1A4F0	135 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	ODAM	A1E959	279 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	C1orf196	B1AJZ1	125 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	FAM90A26	D6RGX4	464 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	SYNGR1	O43759	233 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	OVCH2	Q7RTZ1	564 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	TGIF2LY	Q8IUE0	185 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	TGIF2LX	Q8IUE1	241 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	HPSE2	Q8WWQ2	592 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF714	Q96N38	554 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	TMEM147	Q9BVK8	224 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF355P	Q9NSJ1	428 aa		10.09	□□□□□ -0.79
RBM39-223	ENST00000463004	HPRT1	P00492	218 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	IAPP	P10997	89 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	SCGB2A2	Q13296	93 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	CST9LP1	Q5W188	147 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	PLPPR2	Q96GM1	343 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	SH2D2A	Q9NP31	389 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	ASCL3	Q9NQ33	180 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	CLCF1	Q9UBD9	225 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	VSIG4	Q9Y279	399 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	SHISA3	A0PJX4	238 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	TM4SF5	O14894	197 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	ADRA2A	P08913	450 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	CD37	P11049	281 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	ZNF14	P17017	642 aa	Predicted RBP	10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	MEGF10	Q96KG7	1140 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	SOST	Q9BQB4	213 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	SSX4	O60224	188 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	ATP5I	P56385	69 aa	Predicted RBP	10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	SPSB4	Q96A44	273 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	MAGT1	Q9H0U3	335 aa		10.08	□□□□□ -0.8
RBM39-223	ENST00000463004	SEBOX	Q9HB31	216 aa	Predicted RBP	10.08	□□□□□ -0.8
RBM39-223	ENST00000463004		K7N7A8	449 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	UBE2K	P61086	200 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	MOGAT2	Q3SYC2	334 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	STUM	Q69YW2	141 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	THNSL2	Q86YJ6	484 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	UBTD1	Q9HAC8	227 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	RPS10P5	Q9NQ39	176 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	HBZ	P02008	142 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	HPX	P02790	462 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.07	□□□□□ -0.8	5e-7	■■■□□ 16.7
RBM39-223	ENST00000463004	FAM89B	Q8N5H3	189 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	LHX4	Q969G2	390 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	DAZAP1	Q96EP5	407 aa	Known RBP	10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	MESP1	Q9BRJ9	268 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	SSX5	O60225	188 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	COX6B1	P14854	86 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	MPZ	P25189	248 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	BMI1	P35226	326 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	GNG10	P50151	68 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	AES	Q08117	197 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	SLC38A11	Q08AI6	406 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	ZNF645	Q8N7E2	425 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	WBP1	Q96G27	269 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	KIAA1549L	Q6ZVL6	1849 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	OTX1	P32242	354 aa	Predicted RBP	10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	CD80	P33681	288 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	C3orf36	Q3SXR2	165 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	ADAM5	Q6NVV9	412 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	ABHD14A	Q9BUJ0	271 aa		10.07	□□□□□ -0.8
RBM39-223	ENST00000463004	MT-ND4L	P03901	98 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	MMP7	P09237	267 aa	Predicted RBP	10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	FAM87A	P0C7U9	286 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	OR10S1	Q8NGN2	331 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	TMEM222	Q9H0R3	208 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	BIN3	Q9NQY0	253 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	TRBV23-1	A0A0A0MS06	115 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004		A0A1W2PP11	408 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	CRYM-AS1	A6NIL9	109 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	C10orf142	B7Z368	130 aa		10.06	□□□□□ -0.8
RBM39-223	ENST00000463004	COMP	P49747	757 aa	Predicted RBP	10.06	□□□□□ -0.8

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