RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 REG1BP48304 166 aa15.02■□□□□ -0
VARS-220ENST00000461874 EBI3Q14213 229 aa15.02■□□□□ -0
VARS-220ENST00000461874 Q3ZCU0 254 aa15.02■□□□□ -0
VARS-220ENST00000461874 SYT6Q5T7P8 510 aaPredicted RBP15.02■□□□□ -0
VARS-220ENST00000461874 RNLSQ5VYX0 342 aa15.02■□□□□ -0
VARS-220ENST00000461874 MOB3BQ86TA1 216 aa15.02■□□□□ -0
VARS-220ENST00000461874 NKAIN3Q8N8D7 197 aa15.02■□□□□ -0
VARS-220ENST00000461874 UQCC2Q9BRT2 126 aa15.02■□□□□ -0
VARS-220ENST00000461874 TRAPPC2LQ9UL33 140 aa15.02■□□□□ -0
VARS-220ENST00000461874 PEX16Q9Y5Y5 336 aa15.02■□□□□ -0
VARS-220ENST00000461874 DNAH3Q8TD57 4116 aa15.02□□□□□ -0.01
VARS-220ENST00000461874 IGHV3-43A0A0B4J1X8 118 aa15.01□□□□□ -0.01
VARS-220ENST00000461874 CRTAPO75718 401 aaPredicted RBP15.01□□□□□ -0.01
VARS-220ENST00000461874 CDK1P06493 297 aa15.01□□□□□ -0.01
VARS-220ENST00000461874 IGHV3-43DP0DP04 118 aa15.01□□□□□ -0.01
VARS-220ENST00000461874 REC114Q7Z4M0 266 aa15.01□□□□□ -0.01
VARS-220ENST00000461874 OR4K15Q8NH41 348 aa15.01□□□□□ -0.01
VARS-220ENST00000461874 ST6GALNAC6Q969X2 333 aa15.01□□□□□ -0.01
VARS-220ENST00000461874 Q96M66 194 aa15.01□□□□□ -0.01
VARS-220ENST00000461874 PSMB11A5LHX3 300 aa15□□□□□ -0.01
VARS-220ENST00000461874 SPINT2O43291 252 aa15□□□□□ -0.01
VARS-220ENST00000461874 CA11O75493 328 aa15□□□□□ -0.01
VARS-220ENST00000461874 SC5DO75845 299 aa15□□□□□ -0.01
VARS-220ENST00000461874 GLAP06280 429 aa15□□□□□ -0.01
VARS-220ENST00000461874 CD33P20138 364 aa15□□□□□ -0.01
VARS-220ENST00000461874 FUT3P21217 361 aa15□□□□□ -0.01
VARS-220ENST00000461874 VHLP40337 213 aa15□□□□□ -0.01
VARS-220ENST00000461874 INSL4Q14641 139 aa15□□□□□ -0.01
VARS-220ENST00000461874 TMEM30BQ3MIR4 351 aa15□□□□□ -0.01
VARS-220ENST00000461874 ACSM3Q53FZ2 586 aa15□□□□□ -0.01
VARS-220ENST00000461874 C6orf141Q5SZD1 244 aa15□□□□□ -0.01
VARS-220ENST00000461874 C6orf183Q5T699 404 aa15□□□□□ -0.01
VARS-220ENST00000461874 SIGIRRQ6IA17 410 aa15□□□□□ -0.01
VARS-220ENST00000461874 UNQ9370/PRO34162Q6UXP9 181 aa15□□□□□ -0.01
VARS-220ENST00000461874 IZUMO1Q8IYV9 350 aa15□□□□□ -0.01
VARS-220ENST00000461874 MS4A15Q8N5U1 240 aa15□□□□□ -0.01
VARS-220ENST00000461874 PHF21AQ96BD5 680 aa15□□□□□ -0.01
VARS-220ENST00000461874 EAF1Q96JC9 268 aaPredicted RBP15□□□□□ -0.01
VARS-220ENST00000461874 MND1Q9BWT6 205 aa15□□□□□ -0.01
VARS-220ENST00000461874 DCLRE1BQ9H816 532 aa15□□□□□ -0.01
VARS-220ENST00000461874 RAB9BQ9NP90 201 aa15□□□□□ -0.01
VARS-220ENST00000461874 GHRLQ9UBU3 117 aa15□□□□□ -0.01
VARS-220ENST00000461874 IGHV3-72A0A0B4J1Y9 119 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 PTGES3LE9PB15 166 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 SLC31A2O15432 143 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 HBZP02008 142 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 RCC1P18754 421 aaPredicted RBP14.99□□□□□ -0.01
VARS-220ENST00000461874 IL3RAP26951 378 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 GP2P55259 537 aaKnown RBP14.99□□□□□ -0.01
VARS-220ENST00000461874 KHDC1LQ5JSQ8 128 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 TRAT1Q6PIZ9 186 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 Q6ZPA2 131 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 SLC25A48Q6ZT89 311 aaKnown RBP14.99□□□□□ -0.01
VARS-220ENST00000461874 ZNF329Q86UD4 541 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 Q8N6K4 173 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 ZNF439Q8NDP4 499 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 OR1L1Q8NH94 360 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 CHPT1Q8WUD6 406 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 RTN4IP1Q8WWV3 396 aaPredicted RBP14.99□□□□□ -0.01
VARS-220ENST00000461874 SGCDQ92629 289 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 NOL4LQ96MY1 436 aaPredicted RBP14.99□□□□□ -0.01
VARS-220ENST00000461874 NECAP2Q9NVZ3 263 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 GNG12Q9UBI6 72 aa14.99□□□□□ -0.01
VARS-220ENST00000461874 NKX1-2Q9UD57 310 aaPredicted RBP14.99□□□□□ -0.01
VARS-220ENST00000461874 UBE2QL1A1L167 161 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 SERPINE3A8MV23 424 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 H0YHG0 523 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 IGHG2P01859 326 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 PF4P02776 101 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 IGLL1P15814 213 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 CD1BP29016 333 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 ZNF134P52741 427 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 ZNF137PP52743 207 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 GABPB1Q06547 395 aaPredicted RBP14.98□□□□□ -0.01
VARS-220ENST00000461874 GPR50Q13585 617 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 CT45A1Q5HYN5 189 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 FAM27D1Q5T7N8 215 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 OR10V1Q8NGI7 309 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 OR2T10Q8NGZ9 312 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 CT45A3Q8NHU0 189 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 FAM46BQ96A09 425 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 CYYR1Q96J86 154 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 CST11Q9H112 138 aa14.98□□□□□ -0.01
VARS-220ENST00000461874 LSM2Q9Y333 95 aaKnown RBP14.98□□□□□ -0.01
VARS-220ENST00000461874 NCBP2LA6PVI3 153 aaKnown RBP14.97□□□□□ -0.01
VARS-220ENST00000461874 PDCD6O75340 191 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 UBBP0CG47 229 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 SPHARQ15513 63 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 STEAP3Q658P3 488 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 SLC35E3Q7Z769 313 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 LRRTM1Q86UE6 522 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 TGIF2LXQ8IUE1 241 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 PRR18Q8N4B5 295 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 PHYHIPQ92561 330 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 TMED9Q9BVK6 235 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 TAF9BQ9HBM6 251 aa14.97□□□□□ -0.01
VARS-220ENST00000461874 MBNL3Q9NUK0 354 aaKnown RBP14.97□□□□□ -0.01
VARS-220ENST00000461874 C1orf100Q5SVJ3 147 aa14.96□□□□□ -0.01
VARS-220ENST00000461874 FOXB2Q5VYV0 432 aa14.96□□□□□ -0.01
VARS-220ENST00000461874 GLT8D1Q68CQ7 371 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms