RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 NKAIN3Q8N8D7 197 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 BPIFB6Q8NFQ5 453 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 UBALD1Q8TB05 177 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 CHPT1Q8WUD6 406 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 SGCDQ92629 289 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 UQCC2Q9BRT2 126 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 SELENOIQ9C0D9 397 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 RAB9BQ9NP90 201 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 NECAP2Q9NVZ3 263 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 ETAA1Q9NY74 926 aa9.35□□□□□ -0.91
SOX2-OT-201ENST00000460739 IGHV3-43A0A0B4J1X8 118 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 SPINT2O43291 252 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 IGHG2P01859 326 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 PF4P02776 101 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 GLAP06280 429 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 IGHV3-43DP0DP04 118 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 IGLL1P15814 213 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 IL3RAP26951 378 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 MAPK3P27361 379 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 REG1BP48304 166 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 ZNF137PP52743 207 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 HNF4GQ14541 408 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 C6orf183Q5T699 404 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 RNLSQ5VYX0 342 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 FAM53AQ6NSI3 398 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 TRAT1Q6PIZ9 186 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 SLC25A48Q6ZT89 311 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 MOB3BQ86TA1 216 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 Q8N6K4 173 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 ZNF439Q8NDP4 499 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 TMEM104Q8NE00 496 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 RTN4IP1Q8WWV3 396 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 TFAP2CQ92754 450 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 EAF1Q96JC9 268 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 Q96M66 194 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 BANF2Q9H503 90 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 TRAPPC2LQ9UL33 140 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 ERGIC3Q9Y282 383 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 PEX16Q9Y5Y5 336 aa9.34□□□□□ -0.91
SOX2-OT-201ENST00000460739 SERPINE3A8MV23 424 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 TXNL1O43396 289 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 CRTAPO75718 401 aaPredicted RBP9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 HBZP02008 142 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 CDK1P06493 297 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 RCC1P18754 421 aaPredicted RBP9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 FUT3P21217 361 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 CD1BP29016 333 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 ZNF134P52741 427 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 SLC35A2P78381 396 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 KHDC1LQ5JSQ8 128 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 FOXB2Q5VYV0 432 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 SIGIRRQ6IA17 410 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 UNQ9370/PRO34162Q6UXP9 181 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 SLC35E3Q7Z769 313 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 TGIF2LXQ8IUE1 241 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 MS4A15Q8N5U1 240 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 OR2T10Q8NGZ9 312 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 OR4K15Q8NH41 348 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 RCC1LQ96I51 464 aaKnown RBP9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 NOL4LQ96MY1 436 aaPredicted RBP9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 MND1Q9BWT6 205 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 VCXQ9H320 206 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 MBNL3Q9NUK0 354 aaKnown RBP9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 AURKAIP1Q9NWT8 199 aaPredicted RBP9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 GHRLQ9UBU3 117 aa9.33□□□□□ -0.92
SOX2-OT-201ENST00000460739 IGHV3-72A0A0B4J1Y9 119 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 SLC31A2O15432 143 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 DUS4LO95620 317 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 VHLP40337 213 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 GP2P55259 537 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 GPR50Q13585 617 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 ACSM3Q53FZ2 586 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 CT45A1Q5HYN5 189 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 STEAP3Q658P3 488 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 ZNF554Q86TJ5 538 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 ZNF329Q86UD4 541 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 FOXRED2Q8IWF2 684 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 OR1L1Q8NH94 360 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 CT45A3Q8NHU0 189 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 MRAPQ8TCY5 172 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 CST11Q9H112 138 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 ABCG5Q9H222 651 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 DCLRE1BQ9H816 532 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 PLSCR3Q9NRY6 295 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 ZFP57Q9NU63 452 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 LIN7CQ9NUP9 197 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 GNG12Q9UBI6 72 aa9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 LSM2Q9Y333 95 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-201ENST00000460739 UBE2QL1A1L167 161 aa9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 LINC01548A6NM66 108 aa9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 NCBP2LA6PVI3 153 aaKnown RBP9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 H0YHG0 523 aa9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 PDCD6O75340 191 aa9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 MOSP00540 346 aa9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 UBBP0CG47 229 aa9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 SLC6A1P30531 599 aa9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 RPL23AP62750 156 aaKnown RBP9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 SLC35B1P78383 322 aa9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 GABPB1Q06547 395 aaPredicted RBP9.31□□□□□ -0.92
SOX2-OT-201ENST00000460739 INSL4Q14641 139 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms