RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SLC25A25Q6KCM7 469 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 DAZ4Q86SG3 579 aaKnown RBP1.67□□□□□ -2.14
RFC4-211ENST00000460408 NT5DC3Q86UY8 548 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 DEFB119Q8N690 84 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 FAM57AQ8TBR7 257 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 PHF10Q8WUB8 498 aaKnown RBP1.67□□□□□ -2.14
RFC4-211ENST00000460408 CACNG8Q8WXS5 425 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 TNFRSF14Q92956 283 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 FAM131CQ96AQ9 280 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 SPACA5Q96QH8 159 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 PDCD1LG2Q9BQ51 273 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 ANGPTL4Q9BY76 406 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 TBL1XR1Q9BZK7 514 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 LZTFL1Q9NQ48 299 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 DAZ1Q9NQZ3 744 aaKnown RBP1.67□□□□□ -2.14
RFC4-211ENST00000460408 DDIT4Q9NX09 232 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 SLC7A11Q9UPY5 501 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 CFL2Q9Y281 166 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 ENPP4Q9Y6X5 453 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 MYH1P12882 1939 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 PDCD11Q14690 1871 aaKnown RBP1.67□□□□□ -2.14
RFC4-211ENST00000460408 PKDREJQ9NTG1 2253 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 MEGF8Q7Z7M0 2845 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 TACC2O95359 2948 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 A0A0G2JMP0 313 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 A0A0X1KG70 313 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 FAM240AA0A1B0GVK7 77 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 GSTTP1A0A1W2PQM5 241 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 MKRN2OSH3BPM6 223 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 GATCO43716 136 aaKnown RBP1.66□□□□□ -2.14
RFC4-211ENST00000460408 OR4Q2P0C623 313 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 ATP5J2P56134 94 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 RPS11P62280 158 aaKnown RBP eCLIP1.66□□□□□ -2.14
RFC4-211ENST00000460408 DYNLL1P63167 89 aaKnown RBP1.66□□□□□ -2.14
RFC4-211ENST00000460408 MAPRE2Q15555 327 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 TAL2Q16559 108 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 HSP90AA4PQ58FG1 418 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 CLLU1OSQ5K130 101 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 TMEM69Q5SWH9 247 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 PRNTQ86SH4 94 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 PDPNQ86YL7 162 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 CA13Q8N1Q1 262 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 OR4K2Q8NGD2 314 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 OR13C9Q8NGT0 318 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 NDNFQ8TB73 568 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 NT5CQ8TCD5 201 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 MITD1Q8WV92 249 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 ZMYND19Q96E35 227 aaPredicted RBP1.66□□□□□ -2.14
RFC4-211ENST00000460408 MBOAT7Q96N66 472 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 SEC22CQ9BRL7 303 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 TM6SF2Q9BZW4 377 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 RDH14Q9HBH5 336 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 C6orf50Q9HD87 102 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 ASCL3Q9NQ33 180 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 FLVCR2Q9UPI3 526 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 ORC6Q9Y5N6 252 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 NAV1Q8NEY1 1877 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 KNL1Q8NG31 2342 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 DIDO1Q9BTC0 2240 aaKnown RBP1.66□□□□□ -2.14
RFC4-211ENST00000460408 MYH8P13535 1937 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 FOCADQ5VW36 1801 aa1.66□□□□□ -2.14
RFC4-211ENST00000460408 TRIP11Q15643 1979 aa1.65□□□□□ -2.14
RFC4-211ENST00000460408 IZUMO1RA6ND01 250 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 SEC14L6B5MCN3 397 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 K7EN84 100 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 CIAO1O76071 339 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 TNFSF15O95150 251 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 CSTAP01040 98 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 PFN1P07737 140 aaKnown RBP1.65□□□□□ -2.15
RFC4-211ENST00000460408 OR5AC1P0C628 307 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 INAFM2P0DMQ5 153 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 LIPCP11150 499 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 HLA-GP17693 338 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 CD9P21926 228 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 HTR2CP28335 458 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 TEAD1P28347 426 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 DEKP35659 375 aaKnown RBP1.65□□□□□ -2.15
RFC4-211ENST00000460408 PSMB2P49721 201 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 RGS6P49758 472 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 CARD18P57730 90 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 FLI1Q01543 452 aaPredicted RBP1.65□□□□□ -2.15
RFC4-211ENST00000460408 ATP5G2Q06055 141 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 IFFO1Q0D2I5 559 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 LAMTOR4Q0VGL1 99 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 TRDNQ13061 729 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 PMVKQ15126 192 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 PDGFRLQ15198 375 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 STK38Q15208 465 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 FAM131AQ6UXB0 335 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 LRRC8AQ8IWT6 810 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 FAM58AQ8N1B3 248 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 ZFP62Q8NB50 900 aaPredicted RBP1.65□□□□□ -2.15
RFC4-211ENST00000460408 ZNF680Q8NEM1 530 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 ZNF555Q8NEP9 628 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 ORAOV1Q8WV07 137 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 RNF170Q96K19 258 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 DERL3Q96Q80 235 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 TMED9Q9BVK6 235 aa1.65□□□□□ -2.15
RFC4-211ENST00000460408 CHMP4BQ9H444 224 aaKnown RBP1.65□□□□□ -2.15
RFC4-211ENST00000460408 FAM60AQ9NP50 221 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms