RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 SMAD5-AS1Q9Y6J3 95 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 I3L521 148 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 SLC31A2O15432 143 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 CSTBP04080 98 aaKnown RBP9.6□□□□□ -0.87
GPNMB-204ENST00000459927 VDAC1P21796 283 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 IL3RAP26951 378 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 RASSF2P50749 326 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 RBM11P57052 281 aaKnown RBP9.6□□□□□ -0.87
GPNMB-204ENST00000459927 ATAD3CQ5T2N8 411 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 CASC10Q5T4H9 136 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 STEAP3Q658P3 488 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF497Q6ZNH5 498 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 SLC25A48Q6ZT89 311 aaKnown RBP9.6□□□□□ -0.87
GPNMB-204ENST00000459927 SBSPONQ8IVN8 264 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF439Q8NDP4 499 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 MYOZ3Q8TDC0 251 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 RGP1Q92546 391 aaPredicted RBP9.6□□□□□ -0.87
GPNMB-204ENST00000459927 RITA1Q96K30 269 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 UBE2E2Q96LR5 201 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 Q96MT0 163 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 FAM192AQ9GZU8 254 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 TMEM138Q9NPI0 162 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 MRPS18AQ9NVS2 196 aaKnown RBP9.6□□□□□ -0.87
GPNMB-204ENST00000459927 TAS2R4Q9NYW5 299 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 ORC6Q9Y5N6 252 aa9.6□□□□□ -0.87
GPNMB-204ENST00000459927 TENM2Q9NT68 2774 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 FAM90A10PA6NDY2 464 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 ATP5HO75947 161 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF93P35789 620 aaPredicted RBP9.59□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF137PP52743 207 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 RUNX1Q01196 453 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 RAB40BQ12829 278 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 MPV17LQ2QL34 196 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 SYT6Q5T7P8 510 aaPredicted RBP9.59□□□□□ -0.87
GPNMB-204ENST00000459927 ASPHD1Q5U4P2 390 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 TMEM65Q6PI78 240 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 LINC00596Q86U02 117 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 OR52I1Q8NGK6 324 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 MUC7Q8TAX7 377 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 GPR148Q8TDV2 347 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 S100A13Q99584 98 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 PAK1IP1Q9NWT1 392 aaPredicted RBP9.59□□□□□ -0.87
GPNMB-204ENST00000459927 GMPPBQ9Y5P6 360 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 WSB1Q9Y6I7 421 aa9.59□□□□□ -0.87
GPNMB-204ENST00000459927 A0A1W2PP11 408 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 C12orf77C9JDV5 145 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 G3V318 75 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 EI24O14681 340 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 TXNL1O43396 289 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 ZNF780AO75290 641 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-204ENST00000459927 IGLV1-40P01703 118 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 CD2P06729 351 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 LIMS3P0CW19 117 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 LIMS4P0CW20 117 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 OR5H8P0DN80 308 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 GTF2F2P13984 249 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 SERPINA2P20848 420 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 RAB9AP51151 201 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 ALDH3A2P51648 485 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 CCDC58Q4VC31 144 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 RPL22L1Q6P5R6 122 aaKnown RBP9.58□□□□□ -0.88
GPNMB-204ENST00000459927 ZNF429Q86V71 674 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 DCUN1D4Q92564 292 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 TMEM106AQ96A25 262 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 GNB4Q9HAV0 340 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 ZNF107Q9UII5 783 aaPredicted RBP9.58□□□□□ -0.88
GPNMB-204ENST00000459927 TRAPPC2LQ9UL33 140 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 VSIG4Q9Y279 399 aa9.58□□□□□ -0.88
GPNMB-204ENST00000459927 RPL36Q9Y3U8 105 aaKnown RBP9.58□□□□□ -0.88
GPNMB-204ENST00000459927 MCRIP1C9JLW8 97 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 AIPO00170 330 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 OGG1O15527 345 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 SPINT2O43291 252 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 LANCL1O43813 399 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 GPX5O75715 221 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 LY86O95711 162 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 OR8U8P0C7N1 319 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 BDKRB2P30411 391 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 ZNF616Q08AN1 781 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 GPR176Q14439 515 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 SLC22A6Q4U2R8 563 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 MORN2Q502X0 79 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 FAM27D1Q5T7N8 215 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 DDI2Q5TDH0 399 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 XAF1Q6GPH4 301 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 GAPTQ8N292 157 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 STX19Q8N4C7 294 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 OR4K15Q8NH41 348 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 OR1L1Q8NH94 360 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 NEK7Q8TDX7 302 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 PYDC1Q8WXC3 89 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 ORAI1Q96D31 301 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 OR51J1Q9H342 316 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 FGF20Q9NP95 211 aaPredicted RBP9.57□□□□□ -0.88
GPNMB-204ENST00000459927 GNG12Q9UBI6 72 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 RYR2Q92736 4967 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 STAB2Q8WWQ8 2551 aa9.57□□□□□ -0.88
GPNMB-204ENST00000459927 DYNC2H1Q8NCM8 4307 aaKnown RBP9.57□□□□□ -0.88
GPNMB-204ENST00000459927 SACSQ9NZJ4 4579 aa9.56□□□□□ -0.88
GPNMB-204ENST00000459927 HBZP02008 142 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms