RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 EMC6Q9BV81 110 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 OR2W1Q9Y3N9 320 aa8.58□□□□□ -1.04
UFD1-205ENST00000459854 TRGV10A0A0A0MS01 117 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 FAM221AA4D161 298 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 CD8AP01732 235 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 LINC00614P0C842 121 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 FAHP16930 419 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 FSTP19883 344 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 SKP2Q13309 424 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 ZNF141Q15928 474 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 SAMD13Q5VXD3 122 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 TBC1D26Q86UD7 250 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 DSPPQ9NZW4 1301 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 TECTAO75443 2155 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 DENND4AQ7Z401 1863 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 A8MWL6 223 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 H3BMH7 237 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 PAGE4O60829 102 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 NBL1P41271 181 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 GNG10P50151 68 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 CCL7P80098 99 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 MEF2BQ02080 365 aaPredicted RBP8.57□□□□□ -1.04
UFD1-205ENST00000459854 RBPJQ06330 500 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 HES1Q14469 280 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 OR10AD1Q8NGE0 317 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 MRM2Q9UI43 246 aaKnown RBP8.57□□□□□ -1.04
UFD1-205ENST00000459854 ERRFI1Q9UJM3 462 aaPredicted RBP8.57□□□□□ -1.04
UFD1-205ENST00000459854 CACNA1IQ9P0X4 2223 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 IGHV1OR21-1A0A087WYE8 117 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 MT-CO3P00414 261 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 AMY1AP04745 511 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 CEBPDP49716 269 aaPredicted RBP8.57□□□□□ -1.04
UFD1-205ENST00000459854 LANCL1O43813 399 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 ICOSLGO75144 302 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 TRGC1P0CF51 173 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 CLDN18P56856 261 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 C5orf17Q8NAS9 161 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 THOC3Q96J01 351 aaKnown RBP8.57□□□□□ -1.04
UFD1-205ENST00000459854 FER1L6-AS2Q96M78 137 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 ZPBPQ9BS86 351 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 FGF21Q9NSA1 209 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 CBLN4Q9NTU7 201 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 MIA3Q5JRA6 1907 aa8.57□□□□□ -1.04
UFD1-205ENST00000459854 ACTL6AO96019 429 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 AGFG1P52594 562 aaKnown RBP8.56□□□□□ -1.04
UFD1-205ENST00000459854 AMMECR1LQ6DCA0 310 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 OR11G2Q8NGC1 345 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 OR4S2Q8NH73 311 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 OR2V1Q8NHB1 315 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 SEBOXQ9HB31 216 aaPredicted RBP8.56□□□□□ -1.04
UFD1-205ENST00000459854 DNAJB12Q9NXW2 375 aaKnown RBP8.56□□□□□ -1.04
UFD1-205ENST00000459854 CES1P1Q9UKY3 287 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 NUDT3O95989 172 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 DANCRP0C864 163 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 VSIG10L2P0DP72 767 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 GAMTQ14353 236 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 JOSD1Q15040 202 aaPredicted RBP8.56□□□□□ -1.04
UFD1-205ENST00000459854 SLC25A45Q8N413 288 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 PRSS33Q8NF86 280 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 H1FXQ92522 213 aaKnown RBP8.56□□□□□ -1.04
UFD1-205ENST00000459854 MRPL24Q96A35 216 aaKnown RBP8.56□□□□□ -1.04
UFD1-205ENST00000459854 MIEN1Q9BRT3 115 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 A0A1B0GTL3 188 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 OR4C45A6NMZ5 311 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 H3BVH4 76 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 SPINK4O60575 86 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 INSL4Q14641 139 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 HIKESHIQ53FT3 197 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 OR4D9Q8NGE8 314 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 OR5A2Q8NGI9 324 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 MOB3AQ96BX8 217 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 NPDC1Q9NQX5 325 aaPredicted RBP8.56□□□□□ -1.04
UFD1-205ENST00000459854 TMEM250H0YL14 139 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 UBE2CO00762 179 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 TMEM11P17152 192 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 CEACAM6P40199 344 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 SCCPDHQ8NBX0 429 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 OR6C1Q96RD1 312 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 DNAJC4Q9NNZ3 241 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 VSIG4Q9Y279 399 aa8.56□□□□□ -1.04
UFD1-205ENST00000459854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.55□□□□□ -1.04
UFD1-205ENST00000459854 LMX1BO60663 402 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 CYB561P49447 251 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 HERPUD1Q15011 391 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 C9orf135Q5VTT2 229 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 RAB37Q96AX2 223 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 ALKBH7Q9BT30 221 aaPredicted RBP8.55□□□□□ -1.04
UFD1-205ENST00000459854 PLAC1Q9HBJ0 212 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 LOXL2Q9Y4K0 774 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 GOLGA4Q13439 2230 aaKnown RBP8.55□□□□□ -1.04
UFD1-205ENST00000459854 LINC00587B1AMM8 73 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 NPIPB7O75200 414 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 SMIM13P0DJ93 91 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 YBX1P67809 324 aaKnown RBP8.55□□□□□ -1.04
UFD1-205ENST00000459854 MICBQ29980 383 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 OR2D2Q9H210 308 aa8.55□□□□□ -1.04
UFD1-205ENST00000459854 MPC1Q9Y5U8 109 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms