RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ELLP55199 621 aaPredicted RBP11.71□□□□□ -0.54
TOP3B-213ENST00000457179 MRPS11P82912 194 aaKnown RBP11.71□□□□□ -0.54
TOP3B-213ENST00000457179 OR1C1Q15619 314 aa11.71□□□□□ -0.54
TOP3B-213ENST00000457179 TAF9Q16594 264 aa11.71□□□□□ -0.54
TOP3B-213ENST00000457179 ETFRF1Q6IPR1 90 aa11.71□□□□□ -0.54
TOP3B-213ENST00000457179 SLC35E3Q7Z769 313 aa11.71□□□□□ -0.54
TOP3B-213ENST00000457179 IGKV1D-8A0A087WSZ0 117 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 SERPINA7P05543 415 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 CCL11P51671 97 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 PIGPP57054 158 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 OR5I1Q13606 314 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 IQCJQ1A5X6 159 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 ZZEF1O43149 2961 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 IGKV1-9A0A0C4DH69 117 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 NXPH3O95157 252 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 TK1P04183 234 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF17P17021 662 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 WNT5AP41221 380 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 TFPI2P48307 235 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 NOVA1P51513 510 aaKnown RBP11.7□□□□□ -0.54
TOP3B-213ENST00000457179 TAS2R46P59540 309 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 OR5L1Q8NGL2 311 aa11.7□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF318Q5VUA4 2279 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 A0A1B0GW64 132 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 NKX2-8O15522 239 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 METTL15P1P0C7V9 234 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 IRF2P14316 349 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 SELEP16581 610 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 BLVRBP30043 206 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-213ENST00000457179 RAC1P63000 192 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 PMP22Q01453 160 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 EWSR1Q01844 656 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOP3B-213ENST00000457179 SLC25A47Q6Q0C1 308 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 HDHD3Q9BSH5 251 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-213ENST00000457179 WNT5BQ9H1J7 359 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 SMDT1Q9H4I9 107 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 MRPS18CQ9Y3D5 142 aaKnown RBP11.69□□□□□ -0.54
TOP3B-213ENST00000457179 A0A1W2PNV4 684 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 GABRR1P24046 479 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 CLN3Q13286 438 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 PRSS8Q16651 343 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 MPV17LQ2QL34 196 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 ABCA11PQ4W5N1 156 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 MEX3BQ6ZN04 569 aaKnown RBP11.69□□□□□ -0.54
TOP3B-213ENST00000457179 SLC16A14Q7RTX9 510 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 RCC1LQ96I51 464 aaKnown RBP11.69□□□□□ -0.54
TOP3B-213ENST00000457179 C12orf49Q9H741 205 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 ASCL3Q9NQ33 180 aa11.69□□□□□ -0.54
TOP3B-213ENST00000457179 SMG1Q96Q15 3661 aaKnown RBP11.69□□□□□ -0.54
TOP3B-213ENST00000457179 DHHO43323 396 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 ANGPTL7O43827 346 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 CST7O76096 145 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 HSPB1P04792 205 aaKnown RBP11.68□□□□□ -0.54
TOP3B-213ENST00000457179 FCGR2AP12318 317 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 HNF4GQ14541 408 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 RAB35Q15286 201 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 BRICD5Q6PL45 260 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 KCNG3Q8TAE7 436 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 COL6A6A6NMZ7 2263 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 LRRC3CA6NJW4 275 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 SIAH2O43255 324 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 CYB5R3P00387 301 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-213ENST00000457179 GNMTQ14749 295 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 CEACAM16Q2WEN9 425 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 GPR157Q5UAW9 335 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 PARD6AQ9NPB6 346 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 PNRC2Q9NPJ4 139 aaKnown RBP11.68□□□□□ -0.54
TOP3B-213ENST00000457179 FUT9Q9Y231 359 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 CACNA1DQ01668 2161 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 LCATP04180 440 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 CD33P20138 364 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 PDCD1Q15116 288 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 ADIRFQ15847 76 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 PLA2G2CQ5R387 149 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 C20orf196Q8IYI0 205 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 CMTM1Q8IZ96 169 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 CLDND2Q8NHS1 167 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 NEK7Q8TDX7 302 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 LYZL4Q96KX0 146 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 OR10A2Q9H208 303 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-213ENST00000457179 V9GYS6 101 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 COL12A1Q99715 3063 aa11.68□□□□□ -0.54
TOP3B-213ENST00000457179 IGHV3-64DA0A0J9YX35 117 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 A0A1B0GU03 582 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 NEURL1O76050 574 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 HPNP05981 417 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 MSR1P21757 451 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 ARG2P78540 354 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 KISS1Q15726 138 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 SNIP1Q8TAD8 396 aaKnown RBP11.67□□□□□ -0.54
TOP3B-213ENST00000457179 CDH20Q9HBT6 801 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 LPAR2Q9HBW0 351 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF581Q9P0T4 197 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 PIGLQ9Y2B2 252 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms