RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 C17orf50Q8WW18 174 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 CMSS1Q9BQ75 279 aaKnown RBP11.48□□□□□ -0.57
SMPD4-215ENST00000457039 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
SMPD4-215ENST00000457039 TAF9BQ9HBM6 251 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 C12orf4Q9NQ89 552 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 A0A0A6YYH2 397 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 A6NJ64 397 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 TCF21O43680 179 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 HBZP02008 142 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 ARG1P05089 322 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 ZNF182P17025 639 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-215ENST00000457039 NFYBP25208 207 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 ARL6IP1Q15041 203 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 ZNF260Q3ZCT1 412 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 UBE2NLQ5JXB2 153 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 Q6YL49 198 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 MOB1BQ7L9L4 216 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 ZDHHC22Q8N966 263 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 OR4P4Q8NGL7 312 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 OR1L1Q8NH94 360 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 ACOT12Q8WYK0 555 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 CMTM3Q96MX0 182 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 CHMP1AQ9HD42 196 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-215ENST00000457039 Q9N2K0 584 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 GFOD1Q9NXC2 390 aa11.47□□□□□ -0.57
SMPD4-215ENST00000457039 ELF5Q9UKW6 265 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-215ENST00000457039 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
SMPD4-215ENST00000457039 A0A075B6Q4 140 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 SPINT2O43291 252 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 VENTXO95231 258 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 GSTP1P09211 210 aaKnown RBP11.46□□□□□ -0.57
SMPD4-215ENST00000457039 LTC4SQ16873 150 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 TMEM30BQ3MIR4 351 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 CDNFQ49AH0 187 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 HACD4Q5VWC8 232 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 FAM53AQ6NSI3 398 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-215ENST00000457039 LHFPL4Q7Z7J7 247 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 LDLRAD3Q86YD5 345 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 SAMD12Q8N8I0 201 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 BEND2Q8NDZ0 799 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 OR9G1Q8NH87 305 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 DYNC2LI1Q8TCX1 351 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 RAB9BQ9NP90 201 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 KCNIP1Q9NZI2 227 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 ZNRD1Q9P1U0 126 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 COMMD3Q9UBI1 195 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 PSG11Q9UQ72 335 aa11.46□□□□□ -0.57
SMPD4-215ENST00000457039 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 TMEM235A6NFC5 223 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 J3QR06 171 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 SDCBPO00560 298 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-215ENST00000457039 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
SMPD4-215ENST00000457039 MELTFP08582 738 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 FCGR3AP08637 254 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 FBP1P09467 338 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 CD3GP09693 182 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 LGALS4P56470 323 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 HLA-DRB3P79483 266 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 HTD2P86397 168 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 HLA-DRB5Q30154 266 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 Q3ZCU0 254 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 DYNAPQ8N1N2 210 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 PRR18Q8N4B5 295 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 ZNF439Q8NDP4 499 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 ZNF596Q8TC21 504 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 AP3S1Q92572 193 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 LEAP2Q969E1 77 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 MEGF9Q9H1U4 602 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 CCDC59Q9P031 241 aaKnown RBP11.45□□□□□ -0.58
SMPD4-215ENST00000457039 MGAT4AQ9UM21 535 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 FAM96BQ9Y3D0 163 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
SMPD4-215ENST00000457039 TRAV18A0A075B6X5 111 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 DNAJC9-AS1A6NH13 148 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 LY6LH3BQJ8 138 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 CLDN34H7C241 214 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 ZNF701M0R085 212 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-215ENST00000457039 XRCC3O43542 346 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 IGHV3-7P01780 117 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 APOA1P02647 267 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 EIF4EP06730 217 aaKnown RBP11.44□□□□□ -0.58
SMPD4-215ENST00000457039 SRSF2Q01130 221 aaKnown RBP11.44□□□□□ -0.58
SMPD4-215ENST00000457039 SRSF7Q16629 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMPD4-215ENST00000457039 PNLIPRP3Q17RR3 467 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 RBMS3Q6XE24 437 aaKnown RBP11.44□□□□□ -0.58
SMPD4-215ENST00000457039 Q6ZS49 121 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 LINC00311Q8N616 119 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 C8orf31Q8N9H6 132 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 SETD6Q8TBK2 473 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 PHF21AQ96BD5 680 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 MALSU1Q96EH3 234 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 S100A16Q96FQ6 103 aaKnown RBP11.44□□□□□ -0.58
SMPD4-215ENST00000457039 JMJD8Q96S16 334 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 MMP28Q9H239 520 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 OR2S2Q9NQN1 319 aa11.44□□□□□ -0.58
SMPD4-215ENST00000457039 DIABLOQ9NR28 239 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms