RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 TMEM133Q9H2Q1 129 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 LINC00574Q9H8X3 128 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 Q9N2K0 584 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 C12orf4Q9NQ89 552 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 NIPBLQ6KC79 2804 aaeCLIP11.44□□□□□ -0.58
TIMP1-205ENST00000456754 NF1P21359 2839 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 IGKV1-6A0A0C4DH72 117 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 SDCBPO00560 298 aaPredicted RBP11.43□□□□□ -0.58
TIMP1-205ENST00000456754 SLC31A2O15432 143 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 CA11O75493 328 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 RBP4P02753 201 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 ARG1P05089 322 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 FCGR3AP08637 254 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 FAM157CP0CG43 387 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 SAA4P35542 130 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 RANBP1P43487 201 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 TAS2R20P59543 309 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 DYNC1I2Q13409 638 aaKnown RBP11.43□□□□□ -0.58
TIMP1-205ENST00000456754 HMGN3Q15651 99 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 ABHD12Q8N2K0 398 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 SIGLECL1Q8N7X8 197 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 ACOT12Q8WYK0 555 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 MS4A7Q9GZW8 240 aaPredicted RBP11.43□□□□□ -0.58
TIMP1-205ENST00000456754 PARP12Q9H0J9 701 aaKnown RBP11.43□□□□□ -0.58
TIMP1-205ENST00000456754 AUNIPQ9H7T9 357 aa11.43□□□□□ -0.58
TIMP1-205ENST00000456754 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.43□□□□□ -0.58
TIMP1-205ENST00000456754 TRBV6-6A0A0A6YYG2 114 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 SMIM31A0A1B0GVY4 71 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 MEIOCA2RUB1 952 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 ODF3BA8MYP8 253 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 FAM25AB3EWG3 89 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 FAM25CB3EWG5 89 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 FAM25GB3EWG6 89 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 H3BUI4 141 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 F2RL2O00254 374 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 XRCC3O43542 346 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 ORC5O43913 435 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 TMEM127O75204 238 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 GZMHP20718 246 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 SOX6P35712 828 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 UBE2E1P51965 193 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 HERPUD1Q15011 391 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 RNASE12Q5GAN4 147 aaKnown RBP11.42□□□□□ -0.58
TIMP1-205ENST00000456754 TMEM69Q5SWH9 247 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 NCR3LG1Q68D85 454 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 PRIMA1Q86XR5 153 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 GVQW1Q8N7I0 195 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 AP3S1Q92572 193 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 RBMXL1Q96E39 390 aaKnown RBP11.42□□□□□ -0.58
TIMP1-205ENST00000456754 S100A16Q96FQ6 103 aaKnown RBP11.42□□□□□ -0.58
TIMP1-205ENST00000456754 DUX5Q96PT3 197 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 C6orf62Q9GZU0 229 aaPredicted RBP11.42□□□□□ -0.58
TIMP1-205ENST00000456754 OCEL1Q9H607 264 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 HEXA-AS1Q9H8Q6 139 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 OR1A1Q9P1Q5 309 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 PSG11Q9UQ72 335 aa11.42□□□□□ -0.58
TIMP1-205ENST00000456754 hCG_1809904A0A1W2PP81 198 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 A0A1W2PPE2 198 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 A0A1W2PR64 198 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 A0A1W2PRV1 198 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 A6NHS1 94 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 SERPINE3A8MV23 424 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 RGS5O15539 181 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 HLA-DQB1P01920 261 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 APOA1P02647 267 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 GSTP1P09211 210 aaKnown RBP11.41□□□□□ -0.58
TIMP1-205ENST00000456754 GSTT2P0CG29 244 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 GSTT2BP0CG30 244 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 FPR2P25090 351 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 PPP1CCP36873 323 aaKnown RBP11.41□□□□□ -0.58
TIMP1-205ENST00000456754 ZNF134P52741 427 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 GNG2P59768 71 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 HLA-DRB3P79483 266 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 TUSC1Q2TAM9 212 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 PLA1AQ53H76 456 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 ZNF626Q68DY1 528 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 MZT2AQ6P582 158 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 SNX29P2Q8IUI4 249 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 OR11H6Q8NGC7 330 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 OR4P4Q8NGL7 312 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 OR13D1Q8NGV5 346 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 MCFD2Q8NI22 146 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 IL1F10Q8WWZ1 152 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 PHF21AQ96BD5 680 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 ST6GALNAC5Q9BVH7 336 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 CLEC7AQ9BXN2 247 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 NXF2Q9GZY0 626 aaKnown RBP11.41□□□□□ -0.58
TIMP1-205ENST00000456754 ESM1Q9NQ30 184 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 DIABLOQ9NR28 239 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 GFOD1Q9NXC2 390 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 KCNIP1Q9NZI2 227 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 EXTL2Q9UBQ6 330 aa11.41□□□□□ -0.58
TIMP1-205ENST00000456754 MRPS7Q9Y2R9 242 aaKnown RBP11.41□□□□□ -0.58
TIMP1-205ENST00000456754 A0A087X0M5 115 aa11.4□□□□□ -0.58
TIMP1-205ENST00000456754 A0A1B0GX30 115 aa11.4□□□□□ -0.58
TIMP1-205ENST00000456754 ZNF701M0R085 212 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms