RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 OR5H2Q8NGV7 314 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 RASL10BQ96S79 203 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 RTN4RQ9BZR6 473 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 POLR1DQ9Y2S0 133 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 CNTRLQ7Z7A1 2325 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 USP34Q70CQ2 3546 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 RBMXL2O75526 392 aaKnown RBP8.35□□□□□ -1.07
LINC01940-201ENST00000455228 JTBO76095 146 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 IGHG3P01860 377 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 ISG15P05161 165 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 PLCXD2Q0VAA5 305 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 DEFB125Q8N687 156 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 ZIC4Q8N9L1 334 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 C5orf17Q8NAS9 161 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 SARAFQ96BY9 339 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 GPER1Q99527 375 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 YAE1D1Q9NRH1 226 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 PSG8Q9UQ74 426 aa8.35□□□□□ -1.07
LINC01940-201ENST00000455228 LOC101059948A0A1B0GTJ6 334 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 A0A1W2PQF6 199 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 WIPF3A6NGB9 483 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF891A8MT65 544 aaPredicted RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 FAM166BA8MTA8 275 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 RAD51DO75771 328 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 AMY2BP19961 511 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 RAB32Q13637 225 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF585BQ52M93 769 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 RTN4RL2Q86UN3 420 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 C1orf174Q8IYL3 243 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 OR5AU1Q8NGC0 362 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 OR2I1PQ8NGU4 316 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 RPP25Q9BUL9 199 aaKnown RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 VAMP8Q9BV40 100 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 RP1P56715 2156 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 SLC33A1O00400 549 aaPredicted RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 PLPP3O14495 311 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 SFT2D2O95562 160 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 HLA-DOBP13765 273 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 EN2P19622 333 aaPredicted RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 TFF2Q03403 129 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF506Q5JVG8 444 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 RPL7L1Q6DKI1 246 aaKnown RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 PARM1Q6UWI2 310 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 TMEM217Q8N7C4 229 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 OR1N2Q8NGR9 330 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 PTPMT1Q8WUK0 201 aaPredicted RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 RLN3Q8WXF3 142 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 ADAT3Q96EY9 351 aaPredicted RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 HARBI1Q96MB7 349 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 ST6GALNAC5Q9BVH7 336 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 BANF2Q9H503 90 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 CHD3Q12873 2000 aaKnown RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 A0A1B0GX78 115 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 FAM230AA0A1W2PPH8 454 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 FRG2CA6NGY1 282 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 MT-CO2P00403 227 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 TSPOP30536 169 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 TRAT1Q6PIZ9 186 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 GLIPR1L1Q6UWM5 242 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 Q6ZWC4 215 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 FGF14Q92915 247 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 BADQ92934 168 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 C2orf50Q96LR7 162 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 C5orf66Q9H5L9 145 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
LINC01940-201ENST00000455228 FBRSQ9HAH7 460 aa8.34□□□□□ -1.07
LINC01940-201ENST00000455228 A0A1W2PR80 420 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 DXOO77932 396 aaKnown RBP8.33□□□□□ -1.08
LINC01940-201ENST00000455228 GPR157Q5UAW9 335 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 OPN5Q6U736 354 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 TUSC5Q8IXB3 177 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 BOD1L2Q8IYS8 172 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 SUMF2Q8NBJ7 301 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 LINC00470Q9BZP3 86 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 PARP12Q9H0J9 701 aaKnown RBP8.33□□□□□ -1.08
LINC01940-201ENST00000455228 MRPS28Q9Y2Q9 187 aaKnown RBP8.33□□□□□ -1.08
LINC01940-201ENST00000455228 PTPRSQ13332 1948 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 RANBP2P49792 3224 aaKnown RBP8.33□□□□□ -1.08
LINC01940-201ENST00000455228 SDCBPO00560 298 aaPredicted RBP8.33□□□□□ -1.08
LINC01940-201ENST00000455228 GNG7O60262 68 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 WISP1O95388 367 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 CLPSP04118 112 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 OR1D4P47884 311 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 POU3F1Q03052 451 aaPredicted RBP8.33□□□□□ -1.08
LINC01940-201ENST00000455228 APH1AQ96BI3 265 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 TMEM59Q9BXS4 323 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 SMIM3Q9BZL3 60 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 GPR132Q9UNW8 380 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 VEGFBP49765 207 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 ARHGEF39Q8N4T4 335 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 OR51E1Q8TCB6 317 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 FAM131CQ96AQ9 280 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 OR10C1Q96KK4 312 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 FOXQ1Q9C009 403 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 PBOV1Q9GZY1 135 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 GCM1Q9NP62 436 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 MED29Q9NX70 200 aa8.33□□□□□ -1.08
LINC01940-201ENST00000455228 UBE2J1Q9Y385 318 aaPredicted RBP8.33□□□□□ -1.08
LINC01940-201ENST00000455228 CEACAM18A8MTB9 384 aa8.32□□□□□ -1.08
LINC01940-201ENST00000455228 MPPED1O15442 326 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms