RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 MCRIP1C9JLW8 97 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 PTGES3LE9PB15 166 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 CASQ2O14958 399 aaPredicted RBP6.9□□□□□ -1.3
RFX3-209ENST00000451859 PIN1P1O15428 100 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 ZNF780AO75290 641 aaPredicted RBP6.9□□□□□ -1.3
RFX3-209ENST00000451859 IGKV1D-33P01593 117 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 IGKV1-33P01594 117 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 AMY1AP04745 511 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 AMY2AP04746 511 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 FAM106CPP0CH98 169 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 MGMTP16455 207 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 GABPB1Q06547 395 aaPredicted RBP6.9□□□□□ -1.3
RFX3-209ENST00000451859 BEAN1Q3B7T3 259 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 NHLRC3Q5JS37 347 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 FAM27D1Q5T7N8 215 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 RAB12Q6IQ22 244 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 LINC00596Q86U02 117 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 NANOGP1Q8N7R0 232 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 OR4X2Q8NGF9 303 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 SGCDQ92629 289 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 MYDGFQ969H8 173 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 TMED9Q9BVK6 235 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 NCOR1P1Q9H4R4 102 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 PCDHB16Q9NRJ7 776 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 ETAA1Q9NY74 926 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 GNG12Q9UBI6 72 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 NKX1-2Q9UD57 310 aaPredicted RBP6.9□□□□□ -1.3
RFX3-209ENST00000451859 LINC00527Q9UJ94 153 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 ERGIC3Q9Y282 383 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 C12orf77C9JDV5 145 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 C15orf65H3BRN8 121 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 CCRL2O00421 344 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 SLC31A2O15432 143 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 GPX5O75715 221 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 MPIG6BO95866 241 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 PF4P02776 101 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 MT-ND4P03905 459 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 CDK1P06493 297 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 GZMHP20718 246 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 RAB7AP51149 207 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 AQP4P55087 323 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 CD83Q01151 205 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 PAX5Q02548 391 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 GPR50Q13585 617 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 GPR176Q14439 515 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 MED22Q15528 200 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 TCTEX1D4Q5JR98 221 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 RBM48Q5RL73 367 aaKnown RBP6.89□□□□□ -1.31
RFX3-209ENST00000451859 SYT6Q5T7P8 510 aaPredicted RBP6.89□□□□□ -1.31
RFX3-209ENST00000451859 OR10K2Q6IF99 312 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 ZNF497Q6ZNH5 498 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 C5orf24Q7Z6I8 188 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 ZNF329Q86UD4 541 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 OR8H3Q8N146 312 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 TMEM104Q8NE00 496 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 OR10A7Q8NGE5 316 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 OR1L1Q8NH94 360 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 TFAP2CQ92754 450 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 NOL4LQ96MY1 436 aaPredicted RBP6.89□□□□□ -1.31
RFX3-209ENST00000451859 MND1Q9BWT6 205 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 KCNK15Q9H427 330 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 IFT22Q9H7X7 185 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 LINC00574Q9H8X3 128 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 SPACA1Q9HBV2 294 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 PLCXD1Q9NUJ7 323 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 GFOD1Q9NXC2 390 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 PEX16Q9Y5Y5 336 aa6.89□□□□□ -1.31
RFX3-209ENST00000451859 IGHV1-3A0A0C4DH29 117 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 PSMB11A5LHX3 300 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 NCBP2LA6PVI3 153 aaKnown RBP6.88□□□□□ -1.31
RFX3-209ENST00000451859 M0QZK8 103 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 SPINT2O43291 252 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 HBZP02008 142 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 GAPDHP04406 335 aaKnown RBP6.88□□□□□ -1.31
RFX3-209ENST00000451859 IGLL1P15814 213 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 RCC1P18754 421 aaPredicted RBP6.88□□□□□ -1.31
RFX3-209ENST00000451859 MAPK3P27361 379 aaPredicted RBP6.88□□□□□ -1.31
RFX3-209ENST00000451859 ACSM3Q53FZ2 586 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 C6orf183Q5T699 404 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 NKAIN3Q8N8D7 197 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 C5orf56Q8N8D9 126 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 FBLIM1Q8WUP2 373 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 KRTAP4-11Q9BYQ6 195 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 DCLRE1BQ9H816 532 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 FKBP14Q9NWM8 211 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 SCN3BQ9NY72 215 aa6.88□□□□□ -1.31
RFX3-209ENST00000451859 RCC2Q9P258 522 aaKnown RBP6.88□□□□□ -1.31
RFX3-209ENST00000451859 TSSC4Q9Y5U2 329 aaPredicted RBP6.88□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A18PA6NE21 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A16PA6NEW6 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A20PA6NIJ5 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A9PA6NNJ1 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 SERPINE3A8MV23 424 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A12PA8MX19 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A5PA8MXJ8 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 ZNF736B4DX44 427 aaPredicted RBP6.87□□□□□ -1.31
RFX3-209ENST00000451859 ORC5O43913 435 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A15PP0C7V4 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A13PP0C7W8 464 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms