RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DCTN5Q9BTE1 182 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 FAM234AQ9H0X4 552 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 MMP28Q9H239 520 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 DPAGT1Q9H3H5 408 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 SIRT7Q9NRC8 400 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 ZNF222Q9UK12 451 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 NBEAL1Q6ZS30 2694 aa13.98□□□□□ -0.17
PRPF40A-204ENST00000450303 A0A1W2PRD5 423 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 A0A1W2PRF3 423 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 A0A1W2PRM7 423 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 RAB27BO00194 218 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 SIGLEC5O15389 551 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 SOCS1O15524 211 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 XRCC3O43542 346 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 DHFRP00374 187 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 NDUFB7P17568 137 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 HLA-DMAP28067 261 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 MNDAP41218 407 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 KCNJ3P48549 501 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 CEBPDP49716 269 aaPredicted RBP13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 RAB25P57735 213 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 PAN3Q58A45 887 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 NKAPLQ5M9Q1 402 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 TMEM69Q5SWH9 247 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 SUMF2Q8NBJ7 301 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 ZNRF1Q8ND25 227 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 SMIM4Q8WVI0 70 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 TRIM63Q969Q1 353 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 ABHD1Q96SE0 405 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 PRDM13Q9H4Q3 707 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 SLC25A10Q9UBX3 287 aaPredicted RBP13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 KPTNQ9Y664 436 aa13.97□□□□□ -0.17
PRPF40A-204ENST00000450303 TRAV18A0A075B6X5 111 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 A0A0A6YYD4 124 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 A0A0U1RQK1 487 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 NAP1L6A6NFF2 107 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 SLC33A1O00400 549 aaPredicted RBP13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 MELTFP08582 738 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 CDK2P24941 298 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 CHATP28329 748 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 MRPS15P82914 257 aaKnown RBP13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 DYRK1AQ13627 763 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 ZBTB8BQ8NAP8 495 aaPredicted RBP13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 TMEM185AQ8NFB2 350 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 FCAMRQ8WWV6 532 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 DPCDQ9BVM2 203 aaPredicted RBP13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 PECRQ9BY49 303 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 RCC2Q9P258 522 aaKnown RBP13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 MAB21L2Q9Y586 359 aa13.96□□□□□ -0.17
PRPF40A-204ENST00000450303 TRAV24A0A0B4J272 114 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 FAM181BA6NEQ2 426 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 INMT-MINDY4F8WBC2 141 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 GABARAPH6UMI1 98 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 K7N7A8 449 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 MGST3O14880 152 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 GPR37O15354 613 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 GSTP1P09211 210 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 HIST1H1DP16402 221 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 KLRD1Q13241 179 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 GRK1Q15835 563 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 SIGIRRQ6IA17 410 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 Q8N7P7 452 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 DTX3Q8N9I9 347 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 ARHGAP5-AS1Q96IT6 56 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 MARVELD1Q9BSK0 173 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 ZNF747Q9BV97 191 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 CHIAQ9BZP6 476 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 UNKLQ9H9P5 680 aaKnown RBP13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 NUBP2Q9Y5Y2 271 aa13.95□□□□□ -0.18
PRPF40A-204ENST00000450303 FOXI3A8MTJ6 420 aaPredicted RBP13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 SERPINE3A8MV23 424 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 HSPB6O14558 160 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 CA11O75493 328 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 TK1P04183 234 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 MDKP21741 143 aaPredicted RBP13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 TMEM50BP56557 158 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 ARFRP1Q13795 201 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 PNLIPRP3Q17RR3 467 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 MOGAT2Q3SYC2 334 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 CDNFQ49AH0 187 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 C6orf201Q7Z4U5 140 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 PNKDQ8N490 385 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 C8orf46Q8TAG6 207 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 PPA2Q9H2U2 334 aa13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 PAIP2BQ9ULR5 123 aaKnown RBP13.94□□□□□ -0.18
PRPF40A-204ENST00000450303 TMEM82A0PJX8 343 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 UBE2QL1A1L167 161 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 RNASEK-C17orf49H0YIS7 233 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 PSPNO60542 156 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 ZNF737O75373 536 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 IGHV4-59P01825 116 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 CSN2P05814 226 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 CD3GP09693 182 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 SLC6A1P30531 599 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 FAUP35544 74 aaKnown RBP13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 TAS2R20P59543 309 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 DGCR2P98153 550 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms