RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 IP6K3Q96PC2 410 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 TMEM222Q9H0R3 208 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 RHOFQ9HBH0 211 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 CLCF1Q9UBD9 225 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 IGF2RP11717 2491 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 NXPH2O95156 264 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 SNAPINO95295 136 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 CNOT4O95628 575 aaKnown RBP12.54□□□□□ -0.4
SF1-211ENST00000448404 S100A6P06703 90 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 GABRA6Q16445 453 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 ZNF573Q86YE8 665 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 SELENOHQ8IZQ5 122 aaKnown RBP12.54□□□□□ -0.4
SF1-211ENST00000448404 ZNF610Q8N9Z0 462 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 KLF14Q8TD94 323 aaPredicted RBP12.54□□□□□ -0.4
SF1-211ENST00000448404 EDARADDQ8WWZ3 215 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 TACC2O95359 2948 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 ZGRF1Q86YA3 2104 aa12.54□□□□□ -0.4
SF1-211ENST00000448404 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 A6NLC8 198 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 MLNRO43193 412 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 TXNL1O43396 289 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 PSG2P11465 335 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 UCP2P55851 309 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 SPRNQ5BIV9 151 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 Q6ZR03 302 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 ARL11Q969Q4 196 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 GMPPAQ96IJ6 420 aaPredicted RBP12.53□□□□□ -0.4
SF1-211ENST00000448404 TECTBQ96PL2 329 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 DCTN5Q9BTE1 182 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 ATP23Q9Y6H3 246 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 TPRP12270 2363 aaKnown RBP12.53□□□□□ -0.4
SF1-211ENST00000448404 WDR1O75083 606 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 PTAFRP25105 342 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 PPT1P50897 306 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 LTC4SQ16873 150 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 Q6P435 159 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 Q6ZRM9 215 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 SUCNR1Q9BXA5 334 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 DNAJB11Q9UBS4 358 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 KCNS2Q9ULS6 477 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 RBM7Q9Y580 266 aaKnown RBP12.53□□□□□ -0.4
SF1-211ENST00000448404 ATRXP46100 2492 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 SVEP1Q4LDE5 3571 aa12.53□□□□□ -0.4
SF1-211ENST00000448404 ST8SIA3O43173 380 aa12.52□□□□□ -0.4
SF1-211ENST00000448404 HSPA12AO43301 675 aa12.52□□□□□ -0.4
SF1-211ENST00000448404 PGLYRP1O75594 196 aaPredicted RBP12.52□□□□□ -0.4
SF1-211ENST00000448404 ECI1P42126 302 aa12.52□□□□□ -0.4
SF1-211ENST00000448404 RAB5BP61020 215 aa12.52□□□□□ -0.4
SF1-211ENST00000448404 RUNX1Q01196 453 aa12.52□□□□□ -0.4
SF1-211ENST00000448404 NAAAQ02083 359 aa12.52□□□□□ -0.4
SF1-211ENST00000448404 TMEM171Q8WVE6 324 aa12.52□□□□□ -0.4
SF1-211ENST00000448404 TRAPPC2LQ9UL33 140 aa12.52□□□□□ -0.4
SF1-211ENST00000448404 CHD3Q12873 2000 aaKnown RBP12.52□□□□□ -0.4
SF1-211ENST00000448404 RPS16P62249 146 aaKnown RBP12.52□□□□□ -0.41
SF1-211ENST00000448404 PEA15Q15121 130 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 VHLLQ6RSH7 139 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 RFESDQ8TAC1 157 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 GLRX2Q9NS18 164 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 IGHV3-43A0A0B4J1X8 118 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 IGHV3-43DP0DP04 118 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 AESQ08117 197 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 EIF2S3LQ2VIR3 472 aaKnown RBP12.52□□□□□ -0.41
SF1-211ENST00000448404 TMEM182Q6ZP80 229 aaPredicted RBP12.52□□□□□ -0.41
SF1-211ENST00000448404 LRP11Q86VZ4 500 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 WDR31Q8NA23 367 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 OR4D5Q8NGN0 318 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 OR10J5Q8NHC4 309 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 MPC1Q9Y5U8 109 aa12.52□□□□□ -0.41
SF1-211ENST00000448404 A0A1W2PPE3 182 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 E5RGE8 158 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 ATXN7O15265 892 aaPredicted RBP12.51□□□□□ -0.41
SF1-211ENST00000448404 EWSR1Q01844 656 aaKnown RBP eCLIP12.51□□□□□ -0.413e-6■□□□□ 9.5
SF1-211ENST00000448404 GNMTQ14749 295 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 ZNF324BQ6AW86 544 aaPredicted RBP12.51□□□□□ -0.41
SF1-211ENST00000448404 ODF3L1Q8IXM7 274 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
SF1-211ENST00000448404 TREM2Q9NZC2 230 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 COLCA2A8K830 154 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 J3QT63 122 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 TUSC2O75896 110 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 IGLV2-14P01704 120 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 CECR9P0C854 216 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 NKX2-1P43699 371 aaPredicted RBP12.51□□□□□ -0.41
SF1-211ENST00000448404 IL24Q13007 206 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 OR8G1Q15617 311 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 MPV17LQ2QL34 196 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 MIDNQ504T8 468 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 SEM1Q6ZVN7 128 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
SF1-211ENST00000448404 OR1L1Q8NH94 360 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 OR51M1Q9H341 326 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 UQCC1Q9NVA1 299 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 DKK4Q9UBT3 224 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms