RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 PDCD1LG2Q9BQ51 273 aa2.56□□□□□ -2
CHD9-203ENST00000447540 RTBDNQ9BSG5 229 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 ZNF324O75467 553 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 ADH4P08319 380 aa2.56□□□□□ -2
CHD9-203ENST00000447540 PSG1P11464 419 aa2.56□□□□□ -2
CHD9-203ENST00000447540 RPS4XP62701 263 aaKnown RBP2.56□□□□□ -2
CHD9-203ENST00000447540 MMDQ15546 238 aa2.56□□□□□ -2
CHD9-203ENST00000447540 ERFEQ4G0M1 354 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TMEM164Q5U3C3 297 aa2.56□□□□□ -2
CHD9-203ENST00000447540 RTN4RL2Q86UN3 420 aa2.56□□□□□ -2
CHD9-203ENST00000447540 FAM110BQ8TC76 370 aa2.56□□□□□ -2
CHD9-203ENST00000447540 SFXN3Q9BWM7 321 aa2.56□□□□□ -2
CHD9-203ENST00000447540 RTN4RQ9BZR6 473 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TNFRSF12AQ9NP84 129 aa2.56□□□□□ -2
CHD9-203ENST00000447540 CGGBP1Q9UFW8 167 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 A1L4Q6 167 aa2.56□□□□□ -2
CHD9-203ENST00000447540 C9orf118A6NHY6 69 aa2.56□□□□□ -2
CHD9-203ENST00000447540 OR4C45A6NMZ5 311 aa2.56□□□□□ -2
CHD9-203ENST00000447540 K7EP34 96 aa2.56□□□□□ -2
CHD9-203ENST00000447540 KIR2DS3K7RE56 304 aa2.56□□□□□ -2
CHD9-203ENST00000447540 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 GAS1P54826 345 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TLE1Q04724 770 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TRA2AQ13595 282 aaKnown RBP eCLIP2.56□□□□□ -2
CHD9-203ENST00000447540 KIR2DS3Q14952 304 aa2.56□□□□□ -2
CHD9-203ENST00000447540 MST1LQ2TV78 715 aa2.56□□□□□ -2
CHD9-203ENST00000447540 WDR25Q64LD2 544 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 TP53INP2Q8IXH6 220 aa2.56□□□□□ -2
CHD9-203ENST00000447540 NANOS1Q8WY41 292 aaKnown RBP2.56□□□□□ -2
CHD9-203ENST00000447540 ZMAT3Q9HA38 289 aaKnown RBP2.56□□□□□ -2
CHD9-203ENST00000447540 DMRT3Q9NQL9 472 aa2.56□□□□□ -2
CHD9-203ENST00000447540 C2CD3Q4AC94 2353 aa2.56□□□□□ -2
CHD9-203ENST00000447540 CD300LBA8K4G0 201 aa2.56□□□□□ -2
CHD9-203ENST00000447540 KLK1P06870 262 aa2.56□□□□□ -2
CHD9-203ENST00000447540 NPEPL1Q8NDH3 523 aa2.56□□□□□ -2
CHD9-203ENST00000447540 MGST2Q99735 147 aa2.56□□□□□ -2
CHD9-203ENST00000447540 SMIM3Q9BZL3 60 aa2.56□□□□□ -2
CHD9-203ENST00000447540 POLR3KQ9Y2Y1 108 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 TRBV5-7A0A0A0MS05 114 aa2.56□□□□□ -2
CHD9-203ENST00000447540 OTOL1A6NHN0 477 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 GNG7O60262 68 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TMEM50AO95807 157 aa2.56□□□□□ -2
CHD9-203ENST00000447540 MPIG6BO95866 241 aa2.56□□□□□ -2
CHD9-203ENST00000447540 LDLRAD1Q5T700 205 aa2.56□□□□□ -2
CHD9-203ENST00000447540 C10orf111Q8N326 155 aa2.56□□□□□ -2
CHD9-203ENST00000447540 LRRC25Q8N386 305 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 NKD1Q969G9 470 aa2.56□□□□□ -2
CHD9-203ENST00000447540 NRN1Q9NPD7 142 aa2.56□□□□□ -2
CHD9-203ENST00000447540 MALRD1Q5VYJ5 2156 aa2.56□□□□□ -2
CHD9-203ENST00000447540 RLFQ13129 1914 aa2.56□□□□□ -2
CHD9-203ENST00000447540 IGKV6D-21A0A0A0MT36 114 aa2.56□□□□□ -2
CHD9-203ENST00000447540 LRRC30A6NM36 301 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TNFSF11O14788 317 aa2.56□□□□□ -2
CHD9-203ENST00000447540 CCL25O15444 150 aa2.56□□□□□ -2
CHD9-203ENST00000447540 EDIL3O43854 480 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TRAPPC6AO75865 159 aa2.56□□□□□ -2
CHD9-203ENST00000447540 ONECUT2O95948 504 aa2.56□□□□□ -2
CHD9-203ENST00000447540 SRFP11831 508 aa2.56□□□□□ -2
CHD9-203ENST00000447540 CPMP14384 443 aa2.56□□□□□ -2
CHD9-203ENST00000447540 RPEL1Q2QD12 228 aa2.56□□□□□ -2
CHD9-203ENST00000447540 EEF1DP3Q658K8 133 aa2.56□□□□□ -2
CHD9-203ENST00000447540 ATP5L2Q7Z4Y8 100 aa2.56□□□□□ -2
CHD9-203ENST00000447540 SPRED2Q7Z698 418 aa2.56□□□□□ -2
CHD9-203ENST00000447540 FADS6Q8N9I5 356 aa2.56□□□□□ -2
CHD9-203ENST00000447540 OR10V1Q8NGI7 309 aa2.56□□□□□ -2
CHD9-203ENST00000447540 OR5C1Q8NGR4 320 aa2.56□□□□□ -2
CHD9-203ENST00000447540 PPP1R35Q8TAP8 253 aa2.56□□□□□ -2
CHD9-203ENST00000447540 LOXL4Q96JB6 756 aa2.56□□□□□ -2
CHD9-203ENST00000447540 RSPO3Q9BXY4 272 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 BCAS3Q9H6U6 928 aa2.56□□□□□ -2
CHD9-203ENST00000447540 CYTL1Q9NRR1 136 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TBC1D29Q9UFV1 150 aa2.56□□□□□ -2
CHD9-203ENST00000447540 STRCQ7RTU9 1775 aa2.56□□□□□ -2
CHD9-203ENST00000447540 COL6A6A6NMZ7 2263 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TRBV5-4A0A0C4DH59 114 aa2.56□□□□□ -2
CHD9-203ENST00000447540 NPIPB13A6NJU9 1138 aa2.56□□□□□ -2
CHD9-203ENST00000447540 C4orf47A7E2U8 309 aa2.56□□□□□ -2
CHD9-203ENST00000447540 ZNF850A8MQ14 1090 aa2.56□□□□□ -2
CHD9-203ENST00000447540 FAM157AC9JC47 383 aa2.56□□□□□ -2
CHD9-203ENST00000447540 NPIPB4C9JG80 1138 aa2.56□□□□□ -2
CHD9-203ENST00000447540 IGLC1P0CG04 106 aa2.56□□□□□ -2
CHD9-203ENST00000447540 UCP1P25874 307 aa2.56□□□□□ -2
CHD9-203ENST00000447540 FLT3LGP49771 235 aa2.56□□□□□ -2
CHD9-203ENST00000447540 PHLDA2Q53GA4 152 aa2.56□□□□□ -2
CHD9-203ENST00000447540 TMEM136Q6ZRR5 245 aa2.56□□□□□ -2
CHD9-203ENST00000447540 NDRG1Q92597 394 aaKnown RBP2.56□□□□□ -2
CHD9-203ENST00000447540 KCNS1Q96KK3 526 aa2.56□□□□□ -2
CHD9-203ENST00000447540 C16orf70Q9BSU1 422 aa2.56□□□□□ -2
CHD9-203ENST00000447540 PXMP4Q9Y6I8 212 aa2.56□□□□□ -2
CHD9-203ENST00000447540 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.56□□□□□ -2
CHD9-203ENST00000447540 A6NIN4 97 aa2.56□□□□□ -2
CHD9-203ENST00000447540 SNURFLB1AK76 121 aa2.56□□□□□ -2
CHD9-203ENST00000447540 HYPMO75409 117 aa2.56□□□□□ -2
CHD9-203ENST00000447540 ZNF708P17019 499 aa2.56□□□□□ -2
CHD9-203ENST00000447540 PSMB5P28074 263 aa2.56□□□□□ -2
CHD9-203ENST00000447540 CST5P28325 142 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 KIR2DL1P43626 348 aaPredicted RBP2.56□□□□□ -2
CHD9-203ENST00000447540 FAM189BP81408 668 aa2.56□□□□□ -2
CHD9-203ENST00000447540 CATR1Q13166 79 aa2.56□□□□□ -2
CHD9-203ENST00000447540 CDC42EP5Q6NZY7 148 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms