RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KPTNQ9Y664 436 aa14.75□□□□□ -0.05
TRAPPC4-203ENST00000447216 IGHV3-43A0A0B4J1X8 118 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 FAM172BPA6NC97 362 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 NPIPB11E5RHQ5 1161 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 SPINT2O43291 252 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 CD5LO43866 347 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 TOX4O94842 621 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 IGHV3-43DP0DP04 118 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 MMP9P14780 707 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 NFYBP25208 207 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 KLRD1Q13241 179 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 LINC00299Q6ZSB3 139 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 VMO1Q7Z5L0 202 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 BEST4Q8NFU0 473 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 SMIM4Q8WVI0 70 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 SNAPC3Q92966 411 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 KIRREL1Q96J84 757 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 DMRTB1Q96MA1 342 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 TBX15Q96SF7 602 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 SUCNR1Q9BXA5 334 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 SRRQ9GZT4 340 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 C7orf69Q9H7B7 122 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 ANAPC10Q9UM13 185 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 AUP1Q9Y679 476 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 MAST4O15021 2626 aa14.74□□□□□ -0.05
TRAPPC4-203ENST00000447216 SONP18583 2426 aaKnown RBP14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 IGKV1-6A0A0C4DH72 117 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 POM121CA8CG34 1229 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 FABP7O15540 132 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 LANCL1O43813 399 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 LY6G6DO95868 133 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 AVPP01185 164 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 IGHV1-8P0DP01 117 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 GATA3P23771 443 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 PTBP1P26599 531 aaKnown RBP eCLIP14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 MRPS10P82664 201 aaKnown RBP14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 IGSF11Q5DX21 431 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 HEPN1Q6WQI6 88 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 Q6ZS49 121 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 OR52L2PQ8NGH6 319 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 IL1F10Q8WWZ1 152 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 LEAP2Q969E1 77 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 SDHCQ99643 169 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 LINC00574Q9H8X3 128 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 YAE1D1Q9NRH1 226 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 MTFP1Q9UDX5 166 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 MGAT4AQ9UM21 535 aa14.73□□□□□ -0.05
TRAPPC4-203ENST00000447216 F2RL2O00254 374 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 SDCBPO00560 298 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 GSTZ1O43708 216 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 RBBP9O75884 186 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 IGHV3-7P01780 117 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 FPR2P25090 351 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 RCVRNP35243 200 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 KIR2DS4P43632 304 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 ZNF45Q02386 682 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 GNMTQ14749 295 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 KIR2DS1Q14954 304 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 HERPUD1Q15011 391 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 SRSF7Q16629 238 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 ZNF554Q86TJ5 538 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 PDZD9Q8IXQ8 264 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 Q8N402 240 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 OR10V1Q8NGI7 309 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 S100ZQ8WXG8 99 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 METTL8Q9H825 291 aaKnown RBP14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 ANXA10Q9UJ72 324 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 KCNS2Q9ULS6 477 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 SESN1Q9Y6P5 492 aa14.72□□□□□ -0.05
TRAPPC4-203ENST00000447216 hCG_1809904A0A1W2PP81 198 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 A0A1W2PPE2 198 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 A0A1W2PR64 198 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 A0A1W2PRV1 198 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 J3QLI3 93 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 BET1O15155 118 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 RBP4P02753 201 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 HOXB4P17483 251 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 NAT1P18440 290 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 PRTN3P24158 256 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 COX7A1P24310 79 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 LSAMPQ13449 338 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 C1orf229Q6ZS94 237 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 C1orf122Q6ZSJ8 110 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 LYSMD2Q8IV50 215 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 OR4A4PQ8NGN8 299 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 LHX4Q969G2 390 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 GALMQ96C23 342 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 THAP7Q9BT49 309 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 RAB9BQ9NP90 201 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 OR1A1Q9P1Q5 309 aa14.71□□□□□ -0.05
TRAPPC4-203ENST00000447216 IGHV3OR16-10A0A075B7F0 116 aa14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 A0A1W2PRD5 423 aa14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 A0A1W2PRF3 423 aa14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 A0A1W2PRM7 423 aa14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 PMP2P02689 132 aa14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 FOSL1P15407 271 aa14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 HLA-DMAP28067 261 aa14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 PPP1CCP36873 323 aaKnown RBP14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 LOXL3P58215 753 aa14.7□□□□□ -0.06
TRAPPC4-203ENST00000447216 ARPC4P59998 168 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms