RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 RNF150Q9ULK6 438 aa16.28■□□□□ 0.2
SDCBP-204ENST00000447182 SLC33A1O00400 549 aaPredicted RBP16.27■□□□□ 0.2
SDCBP-204ENST00000447182 CNOT4O95628 575 aaKnown RBP16.27■□□□□ 0.2
SDCBP-204ENST00000447182 GDF1P27539 372 aa16.27■□□□□ 0.2
SDCBP-204ENST00000447182 RND2P52198 227 aa16.27■□□□□ 0.2
SDCBP-204ENST00000447182 OR2B11Q5JQS5 317 aa16.27■□□□□ 0.2
SDCBP-204ENST00000447182 PMS2CLQ68D20 193 aa16.27■□□□□ 0.2
SDCBP-204ENST00000447182 P4HA3Q7Z4N8 544 aa16.27■□□□□ 0.2
SDCBP-204ENST00000447182 PPP1R32Q7Z5V6 425 aa16.27■□□□□ 0.2
SDCBP-204ENST00000447182 LSM10Q969L4 123 aaKnown RBP16.27■□□□□ 0.2
SDCBP-204ENST00000447182 PSMG3Q9BT73 122 aaPredicted RBP16.27■□□□□ 0.2
SDCBP-204ENST00000447182 C5orf49A4QMS7 147 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 LRP5LA4QPB2 252 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 CYB5BO43169 146 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 SERPINE2P07093 398 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 BCL2P10415 239 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 CCNOP22674 350 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 SPNS3Q6ZMD2 512 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 OR10J5Q8NHC4 309 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 OPA3Q9H6K4 179 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 RPRMQ9NS64 109 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 GNG13Q9P2W3 67 aa16.27■□□□□ 0.19
SDCBP-204ENST00000447182 ELOA3CA0A087WX78 387 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-204ENST00000447182 TGOLN2O43493 480 aa16.26■□□□□ 0.19
SDCBP-204ENST00000447182 SYNGR1O43759 233 aa16.26■□□□□ 0.19
SDCBP-204ENST00000447182 SLC25A24Q6NUK1 477 aa16.26■□□□□ 0.19
SDCBP-204ENST00000447182 NPIPB11E5RHQ5 1161 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 H3BP45 60 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 PSG2P11465 335 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 TMEM267Q0VDI3 215 aaPredicted RBP16.25■□□□□ 0.19
SDCBP-204ENST00000447182 SCGB1C1Q8TD33 95 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 PSMF1Q92530 271 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 P2RX4Q99571 388 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 PRRG4Q9BZD6 226 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 TRBV23-1A0A0A0MS06 115 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 TRAV24A0A0B4J272 114 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 CYB5R3P00387 301 aaPredicted RBP16.25■□□□□ 0.19
SDCBP-204ENST00000447182 TRGC2P03986 189 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 RAB11AP62491 216 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF787Q6DD87 383 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 OR5P3Q8WZ94 311 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 HIST1H2AAQ96QV6 131 aa16.25■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF552Q9H707 407 aaPredicted RBP16.25■□□□□ 0.19
SDCBP-204ENST00000447182 PINLYPA6NC86 204 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 DEGS1O15121 323 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 HLA-HP01893 362 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 CCL2P13500 99 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 CYB561P49447 251 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 SERF2P84101 59 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 DNLZQ5SXM8 178 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 Q6ZRM9 215 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 C1orf87Q8N0U7 546 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF525Q8N782 197 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 OR51H1Q8NH63 302 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 RSG1Q9BU20 258 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 ERRFI1Q9UJM3 462 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-204ENST00000447182 A0A096LPE4 126 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 A0A1W2PPZ6 126 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 CLDN34H7C241 214 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 PPP1R2P9O14990 202 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 SYNGR2O43760 224 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 NKX6-1P78426 367 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF726P1Q15940 193 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 HIST3H2BBQ8N257 126 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 OR10V1Q8NGI7 309 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 CA5BP1Q8WTZ4 195 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 FAM210BQ96KR6 192 aa16.24■□□□□ 0.19
SDCBP-204ENST00000447182 PARD6GQ9BYG4 376 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-204ENST00000447182 FREM1Q5H8C1 2179 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 CD300LBA8K4G0 201 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-204ENST00000447182 ATXN7O15265 892 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-204ENST00000447182 IGKV1-39P01597 117 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 IGKV1D-39P04432 117 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 OTX2P32243 289 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 DUSP3P51452 185 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-204ENST00000447182 PMS2P11Q13670 270 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF573Q86YE8 665 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF665Q9H7R5 613 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 SDF2L1Q9HCN8 221 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 CACNG5Q9UF02 275 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 SIT1Q9Y3P8 196 aa16.23■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF503-AS2A6NEH8 195 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 OR5B21A6NL26 309 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 ZFP92A6NM28 416 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 IGLV2-14P01704 120 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 LRRC75BQ2VPJ9 315 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 TCEAL6Q6IPX3 200 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 POM121L2Q96KW2 1035 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 OR14J1Q9UGF5 321 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 MPC1Q9Y5U8 109 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF407Q9C0G0 2248 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 TRBV24-1A0A075B6N3 115 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 HS3ST1O14792 307 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 NGFP01138 241 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 SOD3P08294 240 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 C9orf135Q5VTT2 229 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 FAM58AQ8N1B3 248 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 OR10D4PQ8NGN7 298 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 RNASE11Q8TAA1 199 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms