RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 UBA52P62987 128 aaKnown RBP17.84■□□□□ 0.45
APOE-204ENST00000446996 DYNC1I2Q13409 638 aaKnown RBP17.84■□□□□ 0.45
APOE-204ENST00000446996 SLC9A3R2Q15599 337 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 CTF1Q16619 201 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 RFESDQ8TAC1 157 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 LGALS14Q8TCE9 139 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 FAM216AQ8WUB2 273 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 SLC25A46Q96AG3 418 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 KCTD12Q96CX2 325 aaKnown RBP17.84■□□□□ 0.45
APOE-204ENST00000446996 BCL7BQ9BQE9 202 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 ZNF286AQ9HBT8 521 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.84■□□□□ 0.45
APOE-204ENST00000446996 AK3Q9UIJ7 227 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 COL6A5A8TX70 2615 aa17.84■□□□□ 0.45
APOE-204ENST00000446996 FBN1P35555 2871 aaKnown RBP17.83■□□□□ 0.45
APOE-204ENST00000446996 SERPINE3A8MV23 424 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 TOR1AO14656 332 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 RNASE1P07998 156 aaKnown RBP17.83■□□□□ 0.44
APOE-204ENST00000446996 RCC1P18754 421 aaPredicted RBP17.83■□□□□ 0.44
APOE-204ENST00000446996 NFYBP25208 207 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 VBP1P61758 197 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 GPR107Q5VW38 600 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 C8orf31Q8N9H6 132 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 OR4P4Q8NGL7 312 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 ATG5Q9H1Y0 275 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 TAF9BQ9HBM6 251 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 SCOCQ9UIL1 159 aa17.83■□□□□ 0.44
APOE-204ENST00000446996 A0A0A6YYH2 397 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 A6NJ64 397 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 MFNGO00587 321 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 HOXA3O43365 443 aaPredicted RBP17.82■□□□□ 0.44
APOE-204ENST00000446996 HIST1H1DP16402 221 aaKnown RBP17.82■□□□□ 0.44
APOE-204ENST00000446996 HTR1DP28221 377 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 LOXL3P58215 753 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 HMGN3Q15651 99 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 HLA-DRB5Q30154 266 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 MOGAT2Q3SYC2 334 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 BAIAP2L2Q6UXY1 529 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 LINC00311Q8N616 119 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 OR5R1Q8NH85 324 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 CMSS1Q9BQ75 279 aaKnown RBP17.82■□□□□ 0.44
APOE-204ENST00000446996 NAA50Q9GZZ1 169 aaKnown RBP17.82■□□□□ 0.44
APOE-204ENST00000446996 C12orf4Q9NQ89 552 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 RHBDL2Q9NX52 303 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 GFOD1Q9NXC2 390 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 DPM3Q9P2X0 92 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 KCNK7Q9Y2U2 307 aa17.82■□□□□ 0.44
APOE-204ENST00000446996 VGLL3A8MV65 326 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 J3QR06 171 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 HBZP02008 142 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 RPL15P61313 204 aaKnown RBP17.81■□□□□ 0.44
APOE-204ENST00000446996 HTD2P86397 168 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 LY6G6FQ5SQ64 297 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 LHFPL4Q7Z7J7 247 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 CYYR1Q96J86 154 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 MMP28Q9H239 520 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 CHMP1AQ9HD42 196 aaPredicted RBP17.81■□□□□ 0.44
APOE-204ENST00000446996 PSG11Q9UQ72 335 aa17.81■□□□□ 0.44
APOE-204ENST00000446996 LEUTXA8MZ59 168 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 OOSP1A8MZH6 123 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 SDCBPO00560 298 aaPredicted RBP17.8■□□□□ 0.44
APOE-204ENST00000446996 CD3GP09693 182 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 CEACAM3P40198 252 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 DYNLT3P51808 116 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 MRPS15P82914 257 aaKnown RBP17.8■□□□□ 0.44
APOE-204ENST00000446996 KRTAP24-1Q3LI83 254 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 STEAP3Q658P3 488 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 C16orf87Q6PH81 154 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 OR5H6Q8NGV6 325 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 C17orf50Q8WW18 174 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 CMTM3Q96MX0 182 aa17.8■□□□□ 0.44
APOE-204ENST00000446996 AMMECR1Q9Y4X0 333 aaPredicted RBP17.8■□□□□ 0.44
APOE-204ENST00000446996 BTBD17A6NE02 478 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 BUB1B-PAK6H3BSN5 160 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 GSTP1P09211 210 aaKnown RBP17.79■□□□□ 0.44
APOE-204ENST00000446996 TMBIM6P55061 237 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 SRSF7Q16629 238 aaKnown RBP eCLIP17.79■□□□□ 0.44
APOE-204ENST00000446996 LRRC75BQ2VPJ9 315 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 LDLRAD2Q5SZI1 272 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 OR1L1Q8NH94 360 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 NDNFQ8TB73 568 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 RAB2BQ8WUD1 216 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 ACOT12Q8WYK0 555 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 PHF21AQ96BD5 680 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 GALMQ96C23 342 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 ABCG5Q9H222 651 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 Q9N2K0 584 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 JPT1Q9UK76 154 aa17.79■□□□□ 0.44
APOE-204ENST00000446996 LY6LH3BQJ8 138 aa17.78■□□□□ 0.44
APOE-204ENST00000446996 GNB3P16520 340 aa17.78■□□□□ 0.44
APOE-204ENST00000446996 RORCP51449 518 aa17.78■□□□□ 0.44
APOE-204ENST00000446996 LTC4SQ16873 150 aa17.78■□□□□ 0.44
APOE-204ENST00000446996 CLVS1Q8IUQ0 354 aaPredicted RBP17.78■□□□□ 0.44
APOE-204ENST00000446996 SLC25A38Q96DW6 304 aa17.78■□□□□ 0.44
APOE-204ENST00000446996 MDFIQ99750 246 aa17.78■□□□□ 0.44
APOE-204ENST00000446996 SSX3Q99909 188 aa17.78■□□□□ 0.44
APOE-204ENST00000446996 DCSTAMPQ9H295 470 aa17.78■□□□□ 0.44
APOE-204ENST00000446996 FAM172BPA6NC97 362 aa17.77■□□□□ 0.44
APOE-204ENST00000446996 RNF212BA8MTL3 300 aa17.77■□□□□ 0.44
APOE-204ENST00000446996 YPEL1O60688 119 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms