RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 KLF13Q9Y2Y9 288 aaPredicted RBP11.27□□□□□ -0.61
DDX56-206ENST00000446987 LSM5Q9Y4Y9 91 aaKnown RBP11.27□□□□□ -0.61
DDX56-206ENST00000446987 UBR5O95071 2799 aaPredicted RBP11.27□□□□□ -0.61
DDX56-206ENST00000446987 FREM3P0C091 2139 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 PCNX3Q9H6A9 2034 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 PITX3O75364 302 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 PLA2G2AP14555 144 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 CEACAM8P31997 349 aaPredicted RBP11.26□□□□□ -0.61
DDX56-206ENST00000446987 GABRA3P34903 492 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 MTCP1P56278 107 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 UBE2G2P60604 165 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 RPL23AP62750 156 aaKnown RBP11.26□□□□□ -0.61
DDX56-206ENST00000446987 FOXK1P85037 733 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 ADOQ96SZ5 270 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 CSTL1Q9H114 145 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 ZNF407Q9C0G0 2248 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 ZGRF1Q86YA3 2104 aa11.26□□□□□ -0.61
DDX56-206ENST00000446987 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 TMEM14DPA8MWL7 114 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 TMEM238C9JI98 176 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 IL33O95760 270 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
DDX56-206ENST00000446987 PAFAH1B2P68402 229 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 UNC119Q13432 240 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 P2RY6Q15077 328 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 IGFBP7Q16270 282 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 NUP54Q7Z3B4 507 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 OR4D6Q8NGJ1 314 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 OR51G1Q8NGK1 321 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 OR6N2Q8NGY6 317 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 OR13G1Q8NGZ3 307 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 DDIT4LQ96D03 193 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 ZNF845Q96IR2 970 aaPredicted RBP11.25□□□□□ -0.61
DDX56-206ENST00000446987 MS4A10Q96PG2 267 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 ELOVL3Q9HB03 270 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 DECR2Q9NUI1 292 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 GRHPRQ9UBQ7 328 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 TENM4Q6N022 2769 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 RENP00797 406 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 BMI1P35226 326 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 SFTPDP35247 375 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 ZNF41P51814 821 aaPredicted RBP11.25□□□□□ -0.61
DDX56-206ENST00000446987 CNN1P51911 297 aaKnown RBP11.25□□□□□ -0.61
DDX56-206ENST00000446987 SLC22A24Q8N4F4 322 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 OR5B12Q96R08 314 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 FAM173AQ9BQD7 235 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 TTTY12Q9BZ98 90 aa11.25□□□□□ -0.61
DDX56-206ENST00000446987 CRYM-AS1A6NIL9 109 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
DDX56-206ENST00000446987 F6UZH7 168 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 AHSA1O95433 338 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 RFPL3SP0C7P2 107 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 ZNF705DP0CH99 300 aaPredicted RBP11.24□□□□□ -0.61
DDX56-206ENST00000446987 ZNF705BP0CI00 300 aaPredicted RBP11.24□□□□□ -0.61
DDX56-206ENST00000446987 PTGER4P35408 488 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 UQCRFS1P47985 274 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 ARF6P62330 175 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 LCN2P80188 198 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 ZNF92Q03936 586 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 PRSS8Q16651 343 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.24□□□□□ -0.61
DDX56-206ENST00000446987 C1QL3Q5VWW1 255 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 SLC18B1Q6NT16 456 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 KCTD18Q6PI47 426 aaPredicted RBP11.24□□□□□ -0.61
DDX56-206ENST00000446987 FAM180AQ6UWF9 173 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 DPY19L4Q7Z388 723 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 OR4B1Q8NGF8 309 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 ZNF703Q9H7S9 590 aaPredicted RBP11.24□□□□□ -0.61
DDX56-206ENST00000446987 SLC2A9Q9NRM0 540 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 TMEM106BQ9NUM4 274 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 DNAJB12Q9NXW2 375 aaKnown RBP11.24□□□□□ -0.61
DDX56-206ENST00000446987 SLC45A2Q9UMX9 530 aa11.24□□□□□ -0.61
DDX56-206ENST00000446987 DNAJC13O75165 2243 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 IGHV2-70DA0A0C4DH43 119 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 SCDO00767 359 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 P04436 131 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 VSIG8P0DPA2 414 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ESDP10768 282 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 HIST1H1DP16402 221 aaKnown RBP11.23□□□□□ -0.61
DDX56-206ENST00000446987 GNB3P16520 340 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 GLRA1P23415 457 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ATP6V0CP27449 155 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 SRP14P37108 136 aaKnown RBP11.23□□□□□ -0.61
DDX56-206ENST00000446987 ENDOGQ14249 297 aaKnown RBP11.23□□□□□ -0.61
DDX56-206ENST00000446987 LYG1Q8N1E2 194 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 FBXL14Q8N1E6 418 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ZNF738Q8NE65 137 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ABHD14BQ96IU4 210 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ELOVL1Q9BW60 279 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ZDHHC11Q9H8X9 412 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.23□□□□□ -0.61
DDX56-206ENST00000446987 PRR13Q9NZ81 148 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 OR6C3Q9NZP0 311 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 SLC5A6Q9Y289 635 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 HELZ2Q9BYK8 2649 aaKnown RBP11.23□□□□□ -0.61
DDX56-206ENST00000446987 POLEQ07864 2286 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms