RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 OPN1MW3P0DN78 364 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 GZMHP20718 246 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 MAP2K4P45985 399 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 PRRX1P54821 245 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 LOXL3P58215 753 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 TBCEQ15813 527 aaPredicted RBP8.65□□□□□ -1.02
SF3A1-203ENST00000444440 BEAN1Q3B7T3 259 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 ZNF497Q6ZNH5 498 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 ZNF367Q7RTV3 350 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 TOMM40LQ969M1 308 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 CST11Q9H112 138 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 LRRC42Q9Y546 428 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 NOTCH3Q9UM47 2321 aa8.65□□□□□ -1.03
SF3A1-203ENST00000444440 A0A1W2PRX2 142 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 TMEM30CPA0ZSE6 113 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 FAM90A10PA6NDY2 464 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 FAM90A7PA6NKC0 464 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 FAM90A23PA8MXZ1 464 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 C12orf77C9JDV5 145 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 CRTAPO75718 401 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-203ENST00000444440 PRB2P02812 416 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-203ENST00000444440 MT-ND4P03905 459 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 BRS3P32247 399 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 CEACAM3P40198 252 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 PSMD7P51665 324 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 ARSJQ5FYB0 599 aaPredicted RBP8.64□□□□□ -1.03
SF3A1-203ENST00000444440 SAMD5Q5TGI4 173 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 Q6ZPA2 131 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 C16orf82Q7Z2V1 217 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 LRRTM1Q86UE6 522 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 NDUFA11Q86Y39 141 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 DRAM1Q8N682 238 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 DTX3Q8N9I9 347 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 NEK7Q8TDX7 302 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 CAPSLQ8WWF8 208 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 ARL11Q969Q4 196 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 RPEQ96AT9 228 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 Q96M66 194 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
SF3A1-203ENST00000444440 IGHV3-72A0A0B4J1Y9 119 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 OOSP1A8MZH6 123 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 AIPO00170 330 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 SC5DO75845 299 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 GLAP06280 429 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 MGMTP16455 207 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 RCC1P18754 421 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-203ENST00000444440 FUT3P21217 361 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 HTR2CP28335 458 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 REG1BP48304 166 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 ARHGDIBP52566 201 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 ZNF134P52741 427 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 RPS25P62851 125 aaKnown RBP8.63□□□□□ -1.03
SF3A1-203ENST00000444440 CD83Q01151 205 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 EMX1Q04741 257 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-203ENST00000444440 MADCAM1Q13477 382 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 C1orf100Q5SVJ3 147 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 SYT6Q5T7P8 510 aaPredicted RBP8.63□□□□□ -1.03
SF3A1-203ENST00000444440 OR10K2Q6IF99 312 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 GAPTQ8N292 157 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 ZNF439Q8NDP4 499 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 OR5AU1Q8NGC0 362 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 OR10A7Q8NGE5 316 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 OR4K15Q8NH41 348 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 OR1L1Q8NH94 360 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 KCNG3Q8TAE7 436 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 FCGR1BQ92637 280 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 ST6GALNAC6Q969X2 333 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 FAM46BQ96A09 425 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 GFI1Q99684 422 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 RAB9BQ9NP90 201 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 GFOD1Q9NXC2 390 aa8.63□□□□□ -1.03
SF3A1-203ENST00000444440 IGHV1-3A0A0C4DH29 117 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 UBE2QL1A1L167 161 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 ZNF736B4DX44 427 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-203ENST00000444440 SDCBPO00560 298 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-203ENST00000444440 HSD17B6O14756 317 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 CA11O75493 328 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 IGKV1D-33P01593 117 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 IGKV1-33P01594 117 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 VSIG8P0DPA2 414 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 CD37P11049 281 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 FABP5Q01469 135 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 ZNF816Q0VGE8 651 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-203ENST00000444440 HNF4GQ14541 408 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 GNMTQ14749 295 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 OXLD1Q5BKU9 147 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 C9orf152Q5JTZ5 239 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 KPRPQ5T749 579 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-203ENST00000444440 RAB12Q6IQ22 244 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 CCDC144NLQ6NUI1 221 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 TMEM91Q6ZNR0 172 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 SLC16A12Q6ZSM3 486 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 C5orf56Q8N8D9 126 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 R3HDM4Q96D70 268 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 NOL4LQ96MY1 436 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-203ENST00000444440 PLGRKTQ9HBL7 147 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 ETAA1Q9NY74 926 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 MOB4Q9Y3A3 225 aa8.62□□□□□ -1.03
SF3A1-203ENST00000444440 AMMECR1Q9Y4X0 333 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms