RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 HOXD3P31249 432 aaPredicted RBP9.31□□□□□ -0.92
TTC28-203ENST00000442232 MYCNOSP40205 109 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 THBS3P49746 956 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 GP2P55259 537 aaKnown RBP9.31□□□□□ -0.92
TTC28-203ENST00000442232 RAB25P57735 213 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 CXorf66Q5JRM2 361 aaPredicted RBP9.31□□□□□ -0.92
TTC28-203ENST00000442232 AWAT2Q6E213 333 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 TEX38Q6PEX7 206 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 GLIPR1L1Q6UWM5 242 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 ZNF695Q8IW36 515 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 PRR18Q8N4B5 295 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 OR8H1Q8NGG4 311 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 UBALD1Q8TB05 177 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 RTN4IP1Q8WWV3 396 aaPredicted RBP9.31□□□□□ -0.92
TTC28-203ENST00000442232 MUL1Q969V5 352 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 ORAI1Q96D31 301 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 EAF1Q96JC9 268 aaPredicted RBP9.31□□□□□ -0.92
TTC28-203ENST00000442232 KCNIP1Q9NZI2 227 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 ZNF581Q9P0T4 197 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 LINC00527Q9UJ94 153 aa9.31□□□□□ -0.92
TTC28-203ENST00000442232 PNMA8CA0A1B0GUJ8 204 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 A0A1W2PP11 408 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 EFCAB10A6NFE3 127 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 C15orf65H3BRN8 121 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 GPX5O75715 221 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 CRTAPO75718 401 aaPredicted RBP9.3□□□□□ -0.92
TTC28-203ENST00000442232 MT-ND4P03905 459 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 IGFBP3P17936 291 aaPredicted RBP9.3□□□□□ -0.92
TTC28-203ENST00000442232 VDAC1P21796 283 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 CD1BP29016 333 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 GPR12P47775 334 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 CD69Q07108 199 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 EBI3Q14213 229 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 LRRC36Q1X8D7 754 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 SYT6Q5T7P8 510 aaPredicted RBP9.3□□□□□ -0.92
TTC28-203ENST00000442232 DMKNQ6E0U4 476 aaPredicted RBP9.3□□□□□ -0.92
TTC28-203ENST00000442232 RAB12Q6IQ22 244 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 ETV3LQ6ZN32 361 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 PACRGLQ8N7B6 248 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 NKAIN3Q8N8D7 197 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 ZFP41Q8N8Y5 198 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 OR14A2Q96R54 314 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 ABCG5Q9H222 651 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.3□□□□□ -0.92
TTC28-203ENST00000442232 CLEC2DQ9UHP7 191 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 PEX16Q9Y5Y5 336 aa9.3□□□□□ -0.92
TTC28-203ENST00000442232 SIRT4Q9Y6E7 314 aaPredicted RBP9.3□□□□□ -0.92
TTC28-203ENST00000442232 TRAV8-7A0A075B6U6 113 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 FAM90A10PA6NDY2 464 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 FAM90A7PA6NKC0 464 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 FAM90A23PA8MXZ1 464 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 C12orf77C9JDV5 145 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 CA11O75493 328 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 LALBAP00709 142 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 HBZP02008 142 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 MAS1P04201 325 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 MGMTP16455 207 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 CAPGP40121 348 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 KRTAP10-11P60412 298 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 EGFEM1PQ0D2K5 195 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 ST3GAL4Q11206 333 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 GPR50Q13585 617 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 DOC2BQ14184 412 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 PNLIPRP3Q17RR3 467 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 VAX1Q5SQQ9 334 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 SLC25A48Q6ZT89 311 aaKnown RBP9.29□□□□□ -0.92
TTC28-203ENST00000442232 CDH26Q8IXH8 852 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 C8orf59Q8N0T1 100 aaPredicted RBP9.29□□□□□ -0.92
TTC28-203ENST00000442232 DHRSXQ8N5I4 330 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 OR10V1Q8NGI7 309 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 OR8U1Q8NH10 309 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 OR4K15Q8NH41 348 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 SELENOIQ9C0D9 397 aa9.29□□□□□ -0.92
TTC28-203ENST00000442232 RCC2Q9P258 522 aaKnown RBP9.29□□□□□ -0.92
TTC28-203ENST00000442232 TRBV5-7A0A0A0MS05 114 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 A0A1W2PPK0 400 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 WI2-2373I1.2A0A1W2PRP0 233 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 MAGEA13PA6NCF6 341 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 GLAP06280 429 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 OR5H8P0DN80 308 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 FUT3P21217 361 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 SOX6P35712 828 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 FOXE3Q13461 319 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 Q8N6K4 173 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 Q8N9W7 124 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 OR5M8Q8NGP6 311 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 TFAP2CQ92754 450 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 PGLYRP3Q96LB9 341 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 S1PR3Q99500 378 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 CST11Q9H112 138 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 BANF2Q9H503 90 aa9.28□□□□□ -0.92
TTC28-203ENST00000442232 CNOT2Q9NZN8 540 aaKnown RBP9.28□□□□□ -0.92
TTC28-203ENST00000442232 UBE2QL1A1L167 161 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 CCL24O00175 119 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 SLC31A2O15432 143 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 RGS11O94810 467 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
TTC28-203ENST00000442232 ELANEP08246 267 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 CELP19835 753 aa9.27□□□□□ -0.93
TTC28-203ENST00000442232 WNT4P56705 351 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms