RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 HLA-BQ31612 363 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 MS4A18Q3C1V0 323 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 OR1N1Q8NGS0 311 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 SLC37A2Q8TED4 501 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ASB10Q8WXI3 467 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZBP1Q9H171 429 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 TMEM9BQ9NQ34 198 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 B3GAT1Q9P2W7 334 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF407Q9C0G0 2248 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 SERPINE3A8MV23 424 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 TMEM150CB9EJG8 249 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 F2Z2F3 143 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 TSPAN2O60636 221 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 GYPAP02724 150 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 SERPINA7P05543 415 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF17P17021 662 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 CCKARP32238 428 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZXDAP98168 799 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ARL6IP1Q15041 203 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF726P1Q15940 193 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 OR51G1Q8NGK1 321 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 TMEM170AQ8WVE7 144 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 C18orf12Q96KH6 178 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 WNT10AQ9GZT5 417 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 PARLQ9H300 379 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 NAT8Q9UHE5 227 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 TRAV39A0A0B4J263 110 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF716A6NP11 495 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 MPPED1O15442 326 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 DXOO77932 396 aaKnown RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 PATE4P0C8F1 98 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 CBLN1P23435 193 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 TAS2R30P59541 319 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 PNRC1Q12796 327 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 CNN3Q15417 329 aaKnown RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 KIAA1644Q3SXP7 199 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 LEMD1Q68G75 181 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 TRAT1Q6PIZ9 186 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 VASH2Q86V25 355 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 GAPTQ8N292 157 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 SNIP1Q8TAD8 396 aaKnown RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 MRPL30Q8TCC3 161 aaKnown RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 RHBDD1Q8TEB9 315 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZCCHC14Q8WYQ9 949 aaKnown RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 HLA-CQ95604 372 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF479Q96JC4 524 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF703Q9H7S9 590 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 COLQQ9Y215 455 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 RBM7Q9Y580 266 aaKnown RBP6.5□□□□□ -1.37
HDAC9-214ENST00000441542 NUP210LQ5VU65 1888 aa6.5□□□□□ -1.37
HDAC9-214ENST00000441542 M0QZK8 103 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 GGCTO75223 188 aaKnown RBP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 HRASP01112 189 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 IL3RAP26951 378 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 OTX2P32243 289 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 GUCA1AP43080 201 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 DAP3P51398 398 aaKnown RBP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 SLC35B1P78383 322 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 MYBPHQ13203 477 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 NSDHLQ15738 373 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 VAMP3Q15836 100 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 FNDC7Q5VTL7 733 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 C1orf53Q5VUE5 145 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 Q6ZWC4 215 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 H1FNTQ75WM6 255 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 FAM169BQ8N8A8 192 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 CCDC71LQ8N9Z2 235 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 OR4C5Q8NGB2 326 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 OR10V1Q8NGI7 309 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 OR4D5Q8NGN0 318 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 PLPPR1Q8TBJ4 325 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 MRGPRX4Q96LA9 322 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 MIEN1Q9BRT3 115 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 SMDT1Q9H4I9 107 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 CCL28Q9NRJ3 127 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 SLC7A10Q9NS82 523 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 LYRM2Q9NU23 88 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 MUC3AQ02505 3323 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 TRDCB7Z8K6 153 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 PAGE4O60829 102 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 CDS2O95674 445 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 MT-ATP6P00846 226 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 NTF3P20783 257 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 MNX1P50219 401 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 BLKP51451 505 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 HNRNPA3P51991 378 aaKnown RBP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 RBX1P62877 108 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 TMEM183BQ1AE95 376 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 SPINK9Q5DT21 86 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 NUFIP2Q7Z417 695 aaKnown RBP6.49□□□□□ -1.37
HDAC9-214ENST00000441542 ZDHHC23Q8IYP9 409 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 IL1F10Q8WWZ1 152 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 BADQ92934 168 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 APH1AQ96BI3 265 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 GAL3ST2Q9H3Q3 398 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 OR6C3Q9NZP0 311 aa6.49□□□□□ -1.37
HDAC9-214ENST00000441542 CABIN1Q9Y6J0 2220 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 IGHV3-15A0A0B4J1V0 119 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms