RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CST11Q9H112 138 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ATG5Q9H1Y0 275 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 WDR13Q9H1Z4 485 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 AUNIPQ9H7T9 357 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ELL3Q9HB65 397 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 HMG20AQ9NP66 347 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 PALMDQ9NP74 551 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 C14orf119Q9NWQ9 140 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ZDHHC8Q9ULC8 765 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 NOP16Q9Y3C1 178 aaKnown RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 TRAV18A0A075B6X5 111 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 IGHV3OR15-7A0A075B7D8 119 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 hCG_1807616A0A1W2PRN6 198 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 GAGE12BA1L429 117 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 MEIOCA2RUB1 952 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 GAGE12HA6NDE8 117 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM235A6NFC5 223 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 SRRM5B3KS81 715 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 TRAPPC2LH3BP13 241 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 MFNGO00587 321 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CTDSPLO15194 276 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 SSX5O60225 188 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF780AO75290 641 aaPredicted RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CYB5R3P00387 301 aaPredicted RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 LHBP01229 141 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CSTBP04080 98 aaKnown RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CHRM2P08172 466 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CD3GP09693 182 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 GTF2F2P13984 249 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 GNB3P16520 340 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 PRKACAP17612 351 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CPT2P23786 658 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 GABRR1P24046 479 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 COL8A2P25067 703 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CHATP28329 748 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CD80P33681 288 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 PITPNBP48739 271 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 SRP9P49458 86 aaKnown RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CAPZA1P52907 286 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 PPP5CP53041 499 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 MZT1Q08AG7 82 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 IL18Q14116 193 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 GPR176Q14439 515 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CDNFQ49AH0 187 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 SPANXN2Q5MJ10 180 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM69Q5SWH9 247 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 PYHIN1Q6K0P9 492 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 FIP1L1Q6UN15 594 aaKnown RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 ACP7Q6ZNF0 438 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 C9orf139Q6ZV77 190 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 C6orf201Q7Z4U5 140 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 FAM58AQ8N1B3 248 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM86BQ8N661 226 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 CD177Q8N6Q3 437 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 OR4S1Q8NGB4 309 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 OR10R2Q8NGX6 335 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 OR10Z1Q8NGY1 313 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 OR52I2Q8NH67 350 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 ST8SIA4Q92187 359 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 EMG1Q92979 244 aaKnown RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 BORCS5Q969J3 196 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 YIPF5Q969M3 257 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 S100A16Q96FQ6 103 aaKnown RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 ARHGAP5-AS1Q96IT6 56 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 S100A13Q99584 98 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 SULT4A1Q9BR01 284 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 NUDT16L1Q9BRJ7 211 aaKnown RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 HDHD3Q9BSH5 251 aaPredicted RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 PECRQ9BY49 303 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 IFT22Q9H7X7 185 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 NKIRAS2Q9NYR9 191 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 RCC2Q9P258 522 aaKnown RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 IL19Q9UHD0 177 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF222Q9UK12 451 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 TBC1D24Q9ULP9 559 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 ST3GAL6Q9Y274 331 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 MRPS7Q9Y2R9 242 aaKnown RBP3.9□□□□□ -1.79
PTPN4-206ENST00000441089 POLDIP2Q9Y2S7 368 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 AUP1Q9Y679 476 aa3.9□□□□□ -1.79
PTPN4-206ENST00000441089 IGKV1D-17A0A075B6S4 117 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 A0A0A6YYH2 397 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 TRAV24A0A0B4J272 114 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 A0A1B0GW55 424 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 A0A1W2PQ09 198 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 METTL21EPA6NDL7 271 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 MEIS3P1A6NDR6 274 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A10PA6NDY2 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A18PA6NE21 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A16PA6NEW6 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A20PA6NIJ5 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 A6NJ64 397 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A8PA6NJQ4 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A7PA6NKC0 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 RFPL4AA6NLU0 287 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A22PA8MWA6 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A12PA8MX19 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A5PA8MXJ8 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A23PA8MXZ1 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 RFPL4AL1F8VTS6 287 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM178BH3BS89 294 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms